Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_032682.1 Length=1724 Score E Sequences producing significant alignments: (Bits) Value seq220 87.8 2e-14 >seq220 Length=254280 Score = 87.8 bits (96), Expect = 2e-14 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 913 TGTTGCTTGTTATCCATAT---ACGCTTGCTGTTGAAAACCTCGTACGAGCCTTTGACAG 969 |||| |||||||||||||| ||| || ||| ||| | ||||| ||||| | | Sbjct 10672 TGTTACTTGTTATCCATATTTTACG--TGTTGT-GAATTCTTCGTAGCCTCCTTTTATTG 10728 Query 970 GTACTCGGTAGGGATATCTGTCGGTTATTTTTAGTAGTTCGTCAAGTTCAAGCCATCCGT 1029 | || |||||| || | |||| ||||||||| |||||||| | | |||||||| Sbjct 10729 GAACCTTGTAGGGGTAGCGGTCGCATATTTTTAGGAGTTCGTCGTACTTTATCCATCCGT 10788 Query 1030 AGAAATCATCGATAATAACATTTTCTTGTTGTTTGTAGCCATCCCACCAGTTACCACGAG 1089 |||| || ||||| || || |||||||| ||| || |||||||||| || || | Sbjct 10789 AGAAGTCGTCGATGATGACGCAAGTTTGTTGTTGGTATCCGTCCCACCAGTCTCCGCGTG 10848 Query 1090 CCTTGTAG 1097 |||||| Sbjct 10849 GTTTGTAG 10856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5407623292240