Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhagoletis_20zephyria_20[refseq_20GCF_5F001687245.1_202016-07-19]
86,670 sequences; 1,113,962,544 total letters
Query= NC_012685.1
Length=5759
Score E
Sequences producing significant alignments: (Bits) Value
seq9073 84.2 8e-13
>seq9073
Length=25145
Score = 84.2 bits (92), Expect = 8e-13
Identities = 221/331 (67%), Gaps = 10/331 (3%)
Strand=Plus/Plus
Query 2233 AATTTCAATTTGAGGATAACGACGAAAAAATCACTCAATTTTTAGTAGATTTAATTGATG 2292
||||||||||| | || | | |||||||| |||||||| | |||||| | |||
Sbjct 14302 AATTTCAATTTTATAATGATAATGAAAAAATTTTAAAATTTTTACTTGATTTATATAATG 14361
Query 2293 TACTTGATAAACGAGTTCCAAAACAAAATGCTTTTGCAGTAATTTCGCCACCTAGTTCAG 2352
|| | |||||| |||| ||| ||||| || | || | || ||||||| | | |
Sbjct 14362 TAATAGATAAAAATATTCCTAAAAAAAATACTATATTTGTGTTATCACCACCTAATGCTG 14421
Query 2353 GCAAAAATTTTTTCTTTGACATGATTATGGCAAT-TTGTTTAAACTATGGACAATTAGGA 2411
| ||||||||||| ||||| | |||| || | ||||||||| | || ||| |||||
Sbjct 14422 GAAAAAATTTTTTTTTTGATACATTTAT-TCATTATTGTTTAAATTTCGGTCAAGTAGGA 14480
Query 2412 CAAGCAAACAGACATAATTTGTTTGCATTTCAAGAAGCTCCCAATAAAAGATTAT--TAC 2469
| || || || || ||| || | ||| | | | | |||| || |||
Sbjct 14481 AATTTCAATCGATATTGTTCGTTCCCACTAATGGAA--TGCGTAGACAAGAGAATTATAC 14538
Query 2470 TTTGGAATGAACCAAACTATGAAAGC--GCAATGACAGATACAATAAAAATGATGATGGG 2527
| ||||||||||| | ||| | ||| || ||||| ||| |||||||| | | ||
Sbjct 14539 TATGGAATGAACC--ATTATTAGAGCCATCAGCAACAGAAACATTAAAAATGCTTTTTGG 14596
Query 2528 CGGAGATCCATATACTGTAAGAGTAAAATAT 2558
|| ||| || | ||| | ||| ||||||
Sbjct 14597 AGGTGATACAGTTGCTGCTAAAGTTAAATAT 14627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18299436532200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |