Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_004285.1 Length=4176 Score E Sequences producing significant alignments: (Bits) Value seq686 86.0 2e-13 >seq686 Length=121447 Score = 86.0 bits (94), Expect = 2e-13 Identities = 93/123 (76%), Gaps = 8/123 (7%) Strand=Plus/Plus Query 2109 GAGAAAGAGACAACAGCGGATTCCACTTGGATCAACTACCAGGAGCAGGATCAGTACTAT 2168 ||||| |||||| |||||||| ||||| || ||| |||| ||| || | ||||||| Sbjct 21904 GAGAACGAGACAGAAGCGGATTTCACTTAGACCAATTACCTACAGCCGGGTATGTACTAT 21963 Query 2169 TTGAAGAACCGAT----GATTACACCAGTAAACGTAGGAACATGGAAATTATTATTGGAA 2224 |||||||||| || ||| |||| | || | || |||||||||||| || ||||| Sbjct 21964 TTGAAGAACCAATAATAGATAACACTAATA----TTGGCACATGGAAATTACTAATGGAA 22019 Query 2225 GGA 2227 ||| Sbjct 22020 GGA 22022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13248803209905