Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_011317.1 Length=4139 Score E Sequences producing significant alignments: (Bits) Value seq686 86.0 2e-13 >seq686 Length=121447 Score = 86.0 bits (94), Expect = 2e-13 Identities = 126/176 (72%), Gaps = 12/176 (7%) Strand=Plus/Plus Query 2157 CGAGAACGAGACAACAGTGGATTCCACCTTGACCAAGTACCAGGAGCAGGATCGATCCTA 2216 ||||||||||||| || ||||| ||| | |||||| |||| ||| || | | ||| Sbjct 21903 CGAGAACGAGACAGAAGCGGATTTCACTTAGACCAATTACCTACAGCCGGGTATGTACTA 21962 Query 2217 TTTGAAGAACCAAT----GATCACACCAGTAAACGTCGGAACATGGAAATTATTACTAGA 2272 |||||||||||||| ||| |||| | || | || |||||||||||| || | || Sbjct 21963 TTTGAAGAACCAATAATAGATAACACTAATA----TTGGCACATGGAAATTACTAATGGA 22018 Query 2273 AGGA--AAAACCATAAAAACAGATGTGAAAAATAAAGACAAAGAGCCGATAGAACG 2326 |||| | ||| ||| ||||||| | || || || ||||| |||||||| Sbjct 22019 AGGATCAGAAC--TAACAACAGATATAAAGAACCAATCAAAAGAAATAATAGAACG 22072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13130424625320