Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_015115.1 Length=3893 Score E Sequences producing significant alignments: (Bits) Value seq686 89.7 1e-14 >seq686 Length=121447 Score = 89.7 bits (98), Expect = 1e-14 Identities = 193/284 (68%), Gaps = 16/284 (6%) Strand=Plus/Plus Query 1980 aaaaaaaTAAATGGAATGGTACTAGAGGGAATAACAAATGCAGGAAAATCACTAATATTG 2039 || ||||| ||| | | || || | ||| |||||| ||||||||||| || || | Sbjct 21804 AATAAAATTAATACATTCATAATAAAAGGACCTACAAATACAGGAAAATCATTATTAATA 21863 Query 2040 GACAACTTATTGG--CCATGGTAAAACCAGAAGAGATACCACGAGAAAGAGACAACAGCG 2097 || |||| |||| || ||||| | || |||||| |||||| |||| Sbjct 21864 AACGCACTATTAAAACCAT--TAGAACCAACATTAATTAGTCGAGAACGAGACAGAAGCG 21921 Query 2098 GATTCCACCTTGACCAAGTACCAGGAGCAGGATCAATCCTATTCGAAGAACCAAT----G 2153 |||| ||| | |||||| |||| ||| || | | ||||| ||||||||||| | Sbjct 21922 GATTTCACTTAGACCAATTACCTACAGCCGGGTATGTACTATTTGAAGAACCAATAATAG 21981 Query 2154 ATAACACCAGTAAACGTCGGAACATGGAAATTATTACTGGAAGGa--aaaaccataaaaa 2211 ||||||| | || | || |||||||||||| || |||||||| | ||| ||| || Sbjct 21982 ATAACACTAATA----TTGGCACATGGAAATTACTAATGGAAGGATCAGAAC--TAACAA 22035 Query 2212 cggatgtaaaaaataaaGACAAAGAGCCGATAGAGCGAACACCA 2255 | ||| |||| || || ||||| ||||| ||| |||| Sbjct 22036 CAGATATAAAGAACCAATCAAAAGAAATAATAGAACGACTACCA 22079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12343367008890