Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_015115.1
Length=3893
Score E
Sequences producing significant alignments: (Bits) Value
seq686 89.7 1e-14
>seq686
Length=121447
Score = 89.7 bits (98), Expect = 1e-14
Identities = 193/284 (68%), Gaps = 16/284 (6%)
Strand=Plus/Plus
Query 1980 aaaaaaaTAAATGGAATGGTACTAGAGGGAATAACAAATGCAGGAAAATCACTAATATTG 2039
|| ||||| ||| | | || || | ||| |||||| ||||||||||| || || |
Sbjct 21804 AATAAAATTAATACATTCATAATAAAAGGACCTACAAATACAGGAAAATCATTATTAATA 21863
Query 2040 GACAACTTATTGG--CCATGGTAAAACCAGAAGAGATACCACGAGAAAGAGACAACAGCG 2097
|| |||| |||| || ||||| | || |||||| |||||| ||||
Sbjct 21864 AACGCACTATTAAAACCAT--TAGAACCAACATTAATTAGTCGAGAACGAGACAGAAGCG 21921
Query 2098 GATTCCACCTTGACCAAGTACCAGGAGCAGGATCAATCCTATTCGAAGAACCAAT----G 2153
|||| ||| | |||||| |||| ||| || | | ||||| ||||||||||| |
Sbjct 21922 GATTTCACTTAGACCAATTACCTACAGCCGGGTATGTACTATTTGAAGAACCAATAATAG 21981
Query 2154 ATAACACCAGTAAACGTCGGAACATGGAAATTATTACTGGAAGGa--aaaaccataaaaa 2211
||||||| | || | || |||||||||||| || |||||||| | ||| ||| ||
Sbjct 21982 ATAACACTAATA----TTGGCACATGGAAATTACTAATGGAAGGATCAGAAC--TAACAA 22035
Query 2212 cggatgtaaaaaataaaGACAAAGAGCCGATAGAGCGAACACCA 2255
| ||| |||| || || ||||| ||||| ||| ||||
Sbjct 22036 CAGATATAAAGAACCAATCAAAAGAAATAATAGAACGACTACCA 22079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12343367008890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |