Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_001899.1
Length=5941
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19609 156 2e-34
SEQ21320 125 3e-25
SEQ21318 125 3e-25
SEQ21319 120 1e-23
seq4973 116 1e-22
>SEQ19609
Length=132670
Score = 156 bits (172), Expect = 2e-34
Identities = 362/536 (68%), Gaps = 15/536 (3%)
Strand=Plus/Plus
Query 2414 TTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATTGTAGAATTCTTAA 2473
|| ||||| | ||||||| |||| | ||||| |||| || |||| | |||| ||||
Sbjct 8027 TTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATAAAATTTCAAAATTTTTAA 8086
Query 2474 CTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGCTTTTCTAATTATA 2532
||| |||| |||| || |||||| | ||| || || |||| || | | || ||
Sbjct 8087 ATAAT-TTGTATAATATAATAGATAAAAATATTCCAAAAAAAAATACTATATTTATATTA 8145
Query 2533 TCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTT--GGATTGTTATTAT 2590
|| || || | || |||||||||||| |||||||||| || || ||||| |||
Sbjct 8146 TCACCACCTAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCACTATTGT--TTAA 8203
Query 2591 CATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTTCAAGAAGCTCCAA 2650
| ||||||| | ||| | ||||||| || || |||| | || ||| |
Sbjct 8204 ATTTTGGTCAAGTTGGAAATTTTAATAGATATTGCTCATTTCCATTAATGGAATGTGTTG 8263
Query 2651 ATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCTTAACTGATACTAT 2708
||||||| || | |||||||||||||| ||||| | || ||| ||||| || |
Sbjct 8264 ATAAACGAATAATTTTATGGAATGAACC--ATTATTAGAGCCTTCTGCTACTGAAACATT 8321
Query 2709 AAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATCGTATGGATGCACA 2768
||||||| | || ||||| ||| || |||| | |||||| || ||| |||||
Sbjct 8322 AAAAATGTTATTCGGAGGTGATACTGTAACTGCAAAAGTTAAGTATTGTAATGATGCTGT 8381
Query 2769 TGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTTTTATGTATGAACT 2828
| ||| | | || ||| |||| || | |||| ||| ||| |||| |||| |
Sbjct 8382 TATAATGAGAACACCTATTATAATTTTATCTAACAATGATGT---TTTTCCAAATGATAT 8438
Query 2829 TGCTTTTAGTGATAGAATAATTCAATATAAATGGA-ATGCTGCGCCATTCTTAAAGGATT 2887
|||||| | |||||| || |||||||||| || || | ||||| ||||
Sbjct 8439 AGCTTTTCGGTCTAGAATGTTTACCTATAAATGGAGATCATG-TTTAAAATTAAAAGATT 8497
Query 2888 ATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAAATATAACATT 2943
|| || ||||||||||| | | | || || |||||||| |||||||| |||
Sbjct 8498 ATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAAATATAATATT 8553
>SEQ21320
Length=31550
Score = 125 bits (138), Expect = 3e-25
Identities = 374/564 (66%), Gaps = 20/564 (4%)
Strand=Plus/Minus
Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460
||| || | || || ||||| | ||||||| |||| | ||||| |||| || |||
Sbjct 2977 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 2918
Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519
| |||| |||| ||| |||| |||| || | |||| | ||| || || |||| |
Sbjct 2917 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 2859
Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2579
| | | || |||| || |||| || |||||||||||| |||||||||| || ||
Sbjct 2858 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 2799
Query 2580 --ATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637
|||||| || | |||||| | | | || ||||||| || | |||| | ||
Sbjct 2798 CTATTGTTTAAAT--TTTGGTCAGGTTGAAAAATTTAATAGATATTGTTCATTTCCATTA 2741
Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695
|| | ||| | | | | |||||||||||||| ||||| | || |||
Sbjct 2740 ATGGAGTGTGTTGATAGAAGAATGATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 2683
Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755
||||| || |||||||| | ||||| | ||| || || | | ||||||| ||
Sbjct 2682 CTACTGAGACATTAAAAATGCTCTTTGGTAGTGATACTGTAACAGCAAAAGTTAAATATT 2623
Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815
||| ||||| | ||| | | || ||| |||| || | |||||||| |||| |
Sbjct 2622 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAATGATGTA---T 2566
Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCAA-TATAAATGGA-ATGCTGCGCC 2873
|| |||| | |||||| | |||||| |||| |||||||||| || ||
Sbjct 2565 TTCCAAATGATTTAGCTTTTCGATCTAGAATG-TTCACCTATAAATGGAGATCATGTTTA 2507
Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933
| |||| |||||| || ||||||||||| | | | || || |||||||| ||
Sbjct 2506 AAA-TTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 2448
Query 2934 ATATAACATTACATTTTAATAAAT 2957
|||||| |||| | ||||||||
Sbjct 2447 ATATAATATTA---TATAATAAAT 2427
>SEQ21318
Length=45390
Score = 125 bits (138), Expect = 3e-25
Identities = 374/564 (66%), Gaps = 20/564 (4%)
Strand=Plus/Minus
Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460
||| || | || || ||||| | ||||||| |||| | ||||| |||| || |||
Sbjct 44261 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 44202
Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519
| |||| |||| ||| |||| |||| || | |||| | ||| || || |||| |
Sbjct 44201 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 44143
Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2579
| | | || |||| || |||| || |||||||||||| |||||||||| || ||
Sbjct 44142 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 44083
Query 2580 --ATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637
|||||| || | |||||| | | | || ||||||| || | |||| | ||
Sbjct 44082 CTATTGTTTAAAT--TTTGGTCAGGTTGAAAAATTTAATAGATATTGTTCATTTCCATTA 44025
Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695
|| | ||| | | | | |||||||||||||| ||||| | || |||
Sbjct 44024 ATGGAGTGTGTTGATAGAAGAATGATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 43967
Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755
||||| || |||||||| | ||||| | ||| || || | | ||||||| ||
Sbjct 43966 CTACTGAGACATTAAAAATGCTCTTTGGTAGTGATACTGTAACAGCAAAAGTTAAATATT 43907
Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815
||| ||||| | ||| | | || ||| |||| || | |||||||| |||| |
Sbjct 43906 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAATGATGTA---T 43850
Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCAA-TATAAATGGA-ATGCTGCGCC 2873
|| |||| | |||||| | |||||| |||| |||||||||| || ||
Sbjct 43849 TTCCAAATGATTTAGCTTTTCGATCTAGAATG-TTCACCTATAAATGGAGATCATGTTTA 43791
Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933
| |||| |||||| || ||||||||||| | | | || || |||||||| ||
Sbjct 43790 AAA-TTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 43732
Query 2934 ATATAACATTACATTTTAATAAAT 2957
|||||| |||| | ||||||||
Sbjct 43731 ATATAATATTA---TATAATAAAT 43711
>SEQ21319
Length=5058
Score = 120 bits (132), Expect = 1e-23
Identities = 373/564 (66%), Gaps = 20/564 (4%)
Strand=Plus/Minus
Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460
||| || | || || ||||| | ||||||| |||| | ||||| |||| || |||
Sbjct 4315 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 4256
Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519
| |||| |||| ||| |||| |||| || | |||| | ||| || || |||| |
Sbjct 4255 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 4197
Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2579
| | | || |||| || |||| || |||||||||||| |||||||||| || ||
Sbjct 4196 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 4137
Query 2580 --ATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637
|||||| || | |||||| | ||| | ||||||| || | |||| | ||
Sbjct 4136 CTATTGTTTAAAT--TTTGGTCAGGTTGGAAATTTTAATAGATATTGTTCATTTCCATTA 4079
Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695
|| | ||| | | | | |||||||||||||| ||||| | || |||
Sbjct 4078 ATGGAGTGTGTTGATAGAAGAATTATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 4021
Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755
| ||| || |||||||| | ||||| || ||| || || | | ||||||| ||
Sbjct 4020 CTATTGAGACATTAAAAATGCTCTTTGGTGGTGATACTGTAACAGCAAAAGTTAAATATT 3961
Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815
||| ||||| | ||| | | || ||| |||| || | |||||||| |||| |
Sbjct 3960 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAATGATGTA---T 3904
Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCAA-TATAAATGGA-ATGCTGCGCC 2873
|| |||| | |||||| | |||||| |||| |||||||||| || ||
Sbjct 3903 TTCCAAATGATTTAGCTTTTCGATCTAGAATG-TTCACCTATAAATGGAGATCATGTTTA 3845
Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933
| |||| |||||| || ||||||||||| | | | || || |||||||| ||
Sbjct 3844 AAA-TTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 3786
Query 2934 ATATAACATTACATTTTAATAAAT 2957
|| ||| |||| | ||||||||
Sbjct 3785 ATGTAATATTA---TATAATAAAT 3765
>seq4973
Length=13628
Score = 116 bits (128), Expect = 1e-22
Identities = 372/564 (66%), Gaps = 20/564 (4%)
Strand=Plus/Minus
Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460
||| || | || || ||||| | ||||||| |||| | ||||| |||| || |||
Sbjct 6036 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 5977
Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519
| |||| |||| ||| |||| |||| || | |||| | ||| || || |||| |
Sbjct 5976 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 5918
Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTT-- 2577
| | | || |||| || |||| || |||||||||||| |||||||||| || ||
Sbjct 5917 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 5858
Query 2578 GGATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637
||||| ||| | |||||| | ||| | ||||||| || | |||| | ||
Sbjct 5857 CTATTGT--TTAAATTTTGGTCAGGTTGGAAATTTTAATAGATATTGTTCATTTCCATTA 5800
Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695
|| | ||| | | | | |||||||||||||| ||||| | || |||
Sbjct 5799 ATGGAGTGTGTTGATAGAAGAATTATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 5742
Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755
| ||| || |||||||| | ||||| || ||| || || | | ||||||| ||
Sbjct 5741 CTATTGAGACATTAAAAATGCTCTTTGGTGGTGATACTGTAACAGCAAAAGTTAAATATT 5682
Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815
||| ||||| | ||| | | || ||| |||| || | ||||||| |||| |
Sbjct 5681 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAACGATGTA---T 5625
Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCA-ATATAAATGGA-ATGCTGCGCC 2873
|| |||| | |||||| | |||||| |||| |||||||||| || ||
Sbjct 5624 TTCCAAATGATGTAGCTTTTCGATCTAGAAT-GTTCACCTATAAATGGAGATCATG-TTT 5567
Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933
| |||| |||||| || ||||||||||| | | | || || |||||||| ||
Sbjct 5566 AAAATTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 5507
Query 2934 ATATAACATTACATTTTAATAAAT 2957
|| ||| |||| | ||||||||
Sbjct 5506 ATGTAATATTA---TATAATAAAT 5486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18894002897180
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