Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_001899.1 Length=5941 Score E Sequences producing significant alignments: (Bits) Value SEQ19609 156 2e-34 SEQ21320 125 3e-25 SEQ21318 125 3e-25 SEQ21319 120 1e-23 seq4973 116 1e-22 >SEQ19609 Length=132670 Score = 156 bits (172), Expect = 2e-34 Identities = 362/536 (68%), Gaps = 15/536 (3%) Strand=Plus/Plus Query 2414 TTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATTGTAGAATTCTTAA 2473 || ||||| | ||||||| |||| | ||||| |||| || |||| | |||| |||| Sbjct 8027 TTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATAAAATTTCAAAATTTTTAA 8086 Query 2474 CTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGCTTTTCTAATTATA 2532 ||| |||| |||| || |||||| | ||| || || |||| || | | || || Sbjct 8087 ATAAT-TTGTATAATATAATAGATAAAAATATTCCAAAAAAAAATACTATATTTATATTA 8145 Query 2533 TCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTT--GGATTGTTATTAT 2590 || || || | || |||||||||||| |||||||||| || || ||||| ||| Sbjct 8146 TCACCACCTAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCACTATTGT--TTAA 8203 Query 2591 CATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTTCAAGAAGCTCCAA 2650 | ||||||| | ||| | ||||||| || || |||| | || ||| | Sbjct 8204 ATTTTGGTCAAGTTGGAAATTTTAATAGATATTGCTCATTTCCATTAATGGAATGTGTTG 8263 Query 2651 ATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCTTAACTGATACTAT 2708 ||||||| || | |||||||||||||| ||||| | || ||| ||||| || | Sbjct 8264 ATAAACGAATAATTTTATGGAATGAACC--ATTATTAGAGCCTTCTGCTACTGAAACATT 8321 Query 2709 AAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATCGTATGGATGCACA 2768 ||||||| | || ||||| ||| || |||| | |||||| || ||| ||||| Sbjct 8322 AAAAATGTTATTCGGAGGTGATACTGTAACTGCAAAAGTTAAGTATTGTAATGATGCTGT 8381 Query 2769 TGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTTTTATGTATGAACT 2828 | ||| | | || ||| |||| || | |||| ||| ||| |||| |||| | Sbjct 8382 TATAATGAGAACACCTATTATAATTTTATCTAACAATGATGT---TTTTCCAAATGATAT 8438 Query 2829 TGCTTTTAGTGATAGAATAATTCAATATAAATGGA-ATGCTGCGCCATTCTTAAAGGATT 2887 |||||| | |||||| || |||||||||| || || | ||||| |||| Sbjct 8439 AGCTTTTCGGTCTAGAATGTTTACCTATAAATGGAGATCATG-TTTAAAATTAAAAGATT 8497 Query 2888 ATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAAATATAACATT 2943 || || ||||||||||| | | | || || |||||||| |||||||| ||| Sbjct 8498 ATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAAATATAATATT 8553 >SEQ21320 Length=31550 Score = 125 bits (138), Expect = 3e-25 Identities = 374/564 (66%), Gaps = 20/564 (4%) Strand=Plus/Minus Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460 ||| || | || || ||||| | ||||||| |||| | ||||| |||| || ||| Sbjct 2977 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 2918 Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519 | |||| |||| ||| |||| |||| || | |||| | ||| || || |||| | Sbjct 2917 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 2859 Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2579 | | | || |||| || |||| || |||||||||||| |||||||||| || || Sbjct 2858 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 2799 Query 2580 --ATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637 |||||| || | |||||| | | | || ||||||| || | |||| | || Sbjct 2798 CTATTGTTTAAAT--TTTGGTCAGGTTGAAAAATTTAATAGATATTGTTCATTTCCATTA 2741 Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695 || | ||| | | | | |||||||||||||| ||||| | || ||| Sbjct 2740 ATGGAGTGTGTTGATAGAAGAATGATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 2683 Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755 ||||| || |||||||| | ||||| | ||| || || | | ||||||| || Sbjct 2682 CTACTGAGACATTAAAAATGCTCTTTGGTAGTGATACTGTAACAGCAAAAGTTAAATATT 2623 Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815 ||| ||||| | ||| | | || ||| |||| || | |||||||| |||| | Sbjct 2622 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAATGATGTA---T 2566 Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCAA-TATAAATGGA-ATGCTGCGCC 2873 || |||| | |||||| | |||||| |||| |||||||||| || || Sbjct 2565 TTCCAAATGATTTAGCTTTTCGATCTAGAATG-TTCACCTATAAATGGAGATCATGTTTA 2507 Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933 | |||| |||||| || ||||||||||| | | | || || |||||||| || Sbjct 2506 AAA-TTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 2448 Query 2934 ATATAACATTACATTTTAATAAAT 2957 |||||| |||| | |||||||| Sbjct 2447 ATATAATATTA---TATAATAAAT 2427 >SEQ21318 Length=45390 Score = 125 bits (138), Expect = 3e-25 Identities = 374/564 (66%), Gaps = 20/564 (4%) Strand=Plus/Minus Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460 ||| || | || || ||||| | ||||||| |||| | ||||| |||| || ||| Sbjct 44261 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 44202 Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519 | |||| |||| ||| |||| |||| || | |||| | ||| || || |||| | Sbjct 44201 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 44143 Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2579 | | | || |||| || |||| || |||||||||||| |||||||||| || || Sbjct 44142 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 44083 Query 2580 --ATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637 |||||| || | |||||| | | | || ||||||| || | |||| | || Sbjct 44082 CTATTGTTTAAAT--TTTGGTCAGGTTGAAAAATTTAATAGATATTGTTCATTTCCATTA 44025 Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695 || | ||| | | | | |||||||||||||| ||||| | || ||| Sbjct 44024 ATGGAGTGTGTTGATAGAAGAATGATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 43967 Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755 ||||| || |||||||| | ||||| | ||| || || | | ||||||| || Sbjct 43966 CTACTGAGACATTAAAAATGCTCTTTGGTAGTGATACTGTAACAGCAAAAGTTAAATATT 43907 Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815 ||| ||||| | ||| | | || ||| |||| || | |||||||| |||| | Sbjct 43906 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAATGATGTA---T 43850 Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCAA-TATAAATGGA-ATGCTGCGCC 2873 || |||| | |||||| | |||||| |||| |||||||||| || || Sbjct 43849 TTCCAAATGATTTAGCTTTTCGATCTAGAATG-TTCACCTATAAATGGAGATCATGTTTA 43791 Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933 | |||| |||||| || ||||||||||| | | | || || |||||||| || Sbjct 43790 AAA-TTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 43732 Query 2934 ATATAACATTACATTTTAATAAAT 2957 |||||| |||| | |||||||| Sbjct 43731 ATATAATATTA---TATAATAAAT 43711 >SEQ21319 Length=5058 Score = 120 bits (132), Expect = 1e-23 Identities = 373/564 (66%), Gaps = 20/564 (4%) Strand=Plus/Minus Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460 ||| || | || || ||||| | ||||||| |||| | ||||| |||| || ||| Sbjct 4315 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 4256 Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519 | |||| |||| ||| |||| |||| || | |||| | ||| || || |||| | Sbjct 4255 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 4197 Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2579 | | | || |||| || |||| || |||||||||||| |||||||||| || || Sbjct 4196 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 4137 Query 2580 --ATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637 |||||| || | |||||| | ||| | ||||||| || | |||| | || Sbjct 4136 CTATTGTTTAAAT--TTTGGTCAGGTTGGAAATTTTAATAGATATTGTTCATTTCCATTA 4079 Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695 || | ||| | | | | |||||||||||||| ||||| | || ||| Sbjct 4078 ATGGAGTGTGTTGATAGAAGAATTATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 4021 Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755 | ||| || |||||||| | ||||| || ||| || || | | ||||||| || Sbjct 4020 CTATTGAGACATTAAAAATGCTCTTTGGTGGTGATACTGTAACAGCAAAAGTTAAATATT 3961 Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815 ||| ||||| | ||| | | || ||| |||| || | |||||||| |||| | Sbjct 3960 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAATGATGTA---T 3904 Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCAA-TATAAATGGA-ATGCTGCGCC 2873 || |||| | |||||| | |||||| |||| |||||||||| || || Sbjct 3903 TTCCAAATGATTTAGCTTTTCGATCTAGAATG-TTCACCTATAAATGGAGATCATGTTTA 3845 Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933 | |||| |||||| || ||||||||||| | | | || || |||||||| || Sbjct 3844 AAA-TTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 3786 Query 2934 ATATAACATTACATTTTAATAAAT 2957 || ||| |||| | |||||||| Sbjct 3785 ATGTAATATTA---TATAATAAAT 3765 >seq4973 Length=13628 Score = 116 bits (128), Expect = 1e-22 Identities = 372/564 (66%), Gaps = 20/564 (4%) Strand=Plus/Minus Query 2401 TCATTAAATATAGTTAATGAACTATTAAAATATCAATGTAATGATGATGAAGATTTAATT 2460 ||| || | || || ||||| | ||||||| |||| | ||||| |||| || ||| Sbjct 6036 TCAATAGAAATTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATCAAATA 5977 Query 2461 GTAGAATTCTTAACTAACCTTGT-TAATGTACTAGATAGACGTATACCTAAGTTAAATGC 2519 | |||| |||| ||| |||| |||| || | |||| | ||| || || |||| | Sbjct 5976 TCAAAATTTTTAAATAAT-TTGTATAATATAATTGATAAAAATATTCCAAAAAAAAATAC 5918 Query 2520 TTTTCTAATTATATCTCCTCCAAGTGGTGGTAAAAATTTCTTTTTTGATATGATTTTT-- 2577 | | | || |||| || |||| || |||||||||||| |||||||||| || || Sbjct 5917 TATATTTATATTATCACCACCAAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCA 5858 Query 2578 GGATTGTTATTATCATATGGTCAATTGGGACAAGCTAATAGACATAACTTATTTGCTTTT 2637 ||||| ||| | |||||| | ||| | ||||||| || | |||| | || Sbjct 5857 CTATTGT--TTAAATTTTGGTCAGGTTGGAAATTTTAATAGATATTGTTCATTTCCATTA 5800 Query 2638 CAAGAAGCTCCAAATAAACGTGTACTATTATGGAATGAACCTAATTATGAAAG--TTCCT 2695 || | ||| | | | | |||||||||||||| ||||| | || ||| Sbjct 5799 ATGGAGTGTGTTGATAGAAGAATTATTTTATGGAATGAACC--ATTATTAGAGCCTTCTG 5742 Query 2696 TAACTGATACTATAAAAATGATGTTTGGAGGAGATCCTTATACTGTTAGAGTTAAAAATC 2755 | ||| || |||||||| | ||||| || ||| || || | | ||||||| || Sbjct 5741 CTATTGAGACATTAAAAATGCTCTTTGGTGGTGATACTGTAACAGCAAAAGTTAAATATT 5682 Query 2756 GTATGGATGCACATGTAAAGCGTACTCCTGTTATTATACTTACTAATAATACTGTACCTT 2815 ||| ||||| | ||| | | || ||| |||| || | ||||||| |||| | Sbjct 5681 GTAATGATGCTGTTATAATGAGAACACCTATTATAATTTTGTCTAATAACGATGTA---T 5625 Query 2816 TTATGTATGAACTTGCTTTTAGTGATAGAATAATTCA-ATATAAATGGA-ATGCTGCGCC 2873 || |||| | |||||| | |||||| |||| |||||||||| || || Sbjct 5624 TTCCAAATGATGTAGCTTTTCGATCTAGAAT-GTTCACCTATAAATGGAGATCATG-TTT 5567 Query 2874 ATTCTTAAAGGATTATGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTAAGTAA 2933 | |||| |||||| || ||||||||||| | | | || || |||||||| || Sbjct 5566 AAAATTAAGAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAA 5507 Query 2934 ATATAACATTACATTTTAATAAAT 2957 || ||| |||| | |||||||| Sbjct 5506 ATGTAATATTA---TATAATAAAT 5486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18894002897180