Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_004284.1 Length=5908 Score E Sequences producing significant alignments: (Bits) Value SEQ19609 116 1e-22 >SEQ19609 Length=132670 Score = 116 bits (128), Expect = 1e-22 Identities = 348/529 (66%), Gaps = 11/529 (2%) Strand=Plus/Minus Query 3028 AATATTATATTTACTCAATAAAAGGAAAAATGTCATTGGATGTGGTTTCAATTCATAATC 3087 |||||||||||| | |||||| | || | | | ||||||||||| || |||||| Sbjct 8553 AATATTATATTTTTTTAATAAATGATAACAAGATAAAGGATGTGGTTTTTTTTTATAATC 8494 Query 3088 CTTTAAGAATGGCGCAGCAT-TCCACTTGTATTGAATAATTCTATCACTAAAAGCAGTTT 3146 ||||| | || || |||| || || || |||||| | |||||| | | Sbjct 8493 TTTTAATTTTAAA-CATGATCTCCATTTATAGGTAAACATTCTAGACCGAAAAGCTATAT 8435 Query 3147 CATACATAAAAGGTACAGTATTATTAGTAAGTATTATAACTGGAGTGCGTTTTACATGTG 3206 ||| |||| ||| ||| |||| | ||||||| || || | ||| | | Sbjct 8434 CATTTGGAAAA---ACATCATTGTTAGATAAAATTATAATAGGTGTTCTCATTATAACAG 8378 Query 3207 CATCCATACGATTTTTAACTCTAACAGTATAAGGATCTCCTCCAAACATCATTTTAATTG 3266 |||| ||| || |||||| | |||| || ||| ||||| || | |||||| | || Sbjct 8377 CATCATTACAATACTTAACTTTTGCAGTTACAGTATCACCTCCGAATAACATTTTTAATG 8318 Query 3267 TATCAGTTAAAGAA--CTCTCATAGTTAGGTTCATTCCATAATAATACACGTTTATTAGG 3324 | ||||| |||| |||| ||| | |||||||||||||| | || ||||||| | Sbjct 8317 TTTCAGTAGCAGAAGGCTCTAATAAT--GGTTCATTCCATAAAATTATTCGTTTATCAAC 8260 Query 3325 TGCTTCTTGAAATGCAAACAAGTTATGTCTATTAGCTTGACCTAACTGACCATAAGAT-A 3383 ||| |||| ||| || || ||||||| | || | |||||| || | | Sbjct 8259 ACATTCCATTAATGGAAATGAGCAATATCTATTAAAATTTCCAACTTGACCAAAATTTAA 8200 Query 3384 GTAATAATCCAAAGATCATATCAAAAAAGAAATTTTTACCAGCACTTGGAGGAGATATAA 3443 |||| | || | |||||||||| ||||||||||||||| | || || |||| | Sbjct 8199 ACAATAGT-GAATAAAAGTATCAAAAAAAAAATTTTTACCAGCATTAGGTGGTGATAATA 8141 Query 3444 TAAGAAAAGCATTTAACTTAGGTATACGACGGTCTAATACATTGACCAAATTAGTAAGAA 3503 ||| | || |||| || || ||| |||| || ||| ||||||| | | || Sbjct 8140 TAAATATAGTATTTTTTTTTGGAATATTTTTATCTATTATATTATACAAATTATTTAAAA 8081 Query 3504 ACTCTACAATTAAATCTTCATCATCATTACATTGAAATTTAAGTAATTC 3552 | | | |||| || |||| ||||| | |||| ||||| | ||||| Sbjct 8080 ATTTTGAAATTTTATGATCATTATCATAAAATTGGAATTTTAACAATTC 8032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18788431936190