Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_004284.1
Length=5908
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19609 116 1e-22
>SEQ19609
Length=132670
Score = 116 bits (128), Expect = 1e-22
Identities = 348/529 (66%), Gaps = 11/529 (2%)
Strand=Plus/Minus
Query 3028 AATATTATATTTACTCAATAAAAGGAAAAATGTCATTGGATGTGGTTTCAATTCATAATC 3087
|||||||||||| | |||||| | || | | | ||||||||||| || ||||||
Sbjct 8553 AATATTATATTTTTTTAATAAATGATAACAAGATAAAGGATGTGGTTTTTTTTTATAATC 8494
Query 3088 CTTTAAGAATGGCGCAGCAT-TCCACTTGTATTGAATAATTCTATCACTAAAAGCAGTTT 3146
||||| | || || |||| || || || |||||| | |||||| | |
Sbjct 8493 TTTTAATTTTAAA-CATGATCTCCATTTATAGGTAAACATTCTAGACCGAAAAGCTATAT 8435
Query 3147 CATACATAAAAGGTACAGTATTATTAGTAAGTATTATAACTGGAGTGCGTTTTACATGTG 3206
||| |||| ||| ||| |||| | ||||||| || || | ||| | |
Sbjct 8434 CATTTGGAAAA---ACATCATTGTTAGATAAAATTATAATAGGTGTTCTCATTATAACAG 8378
Query 3207 CATCCATACGATTTTTAACTCTAACAGTATAAGGATCTCCTCCAAACATCATTTTAATTG 3266
|||| ||| || |||||| | |||| || ||| ||||| || | |||||| | ||
Sbjct 8377 CATCATTACAATACTTAACTTTTGCAGTTACAGTATCACCTCCGAATAACATTTTTAATG 8318
Query 3267 TATCAGTTAAAGAA--CTCTCATAGTTAGGTTCATTCCATAATAATACACGTTTATTAGG 3324
| ||||| |||| |||| ||| | |||||||||||||| | || ||||||| |
Sbjct 8317 TTTCAGTAGCAGAAGGCTCTAATAAT--GGTTCATTCCATAAAATTATTCGTTTATCAAC 8260
Query 3325 TGCTTCTTGAAATGCAAACAAGTTATGTCTATTAGCTTGACCTAACTGACCATAAGAT-A 3383
||| |||| ||| || || ||||||| | || | |||||| || | |
Sbjct 8259 ACATTCCATTAATGGAAATGAGCAATATCTATTAAAATTTCCAACTTGACCAAAATTTAA 8200
Query 3384 GTAATAATCCAAAGATCATATCAAAAAAGAAATTTTTACCAGCACTTGGAGGAGATATAA 3443
|||| | || | |||||||||| ||||||||||||||| | || || |||| |
Sbjct 8199 ACAATAGT-GAATAAAAGTATCAAAAAAAAAATTTTTACCAGCATTAGGTGGTGATAATA 8141
Query 3444 TAAGAAAAGCATTTAACTTAGGTATACGACGGTCTAATACATTGACCAAATTAGTAAGAA 3503
||| | || |||| || || ||| |||| || ||| ||||||| | | ||
Sbjct 8140 TAAATATAGTATTTTTTTTTGGAATATTTTTATCTATTATATTATACAAATTATTTAAAA 8081
Query 3504 ACTCTACAATTAAATCTTCATCATCATTACATTGAAATTTAAGTAATTC 3552
| | | |||| || |||| ||||| | |||| ||||| | |||||
Sbjct 8080 ATTTTGAAATTTTATGATCATTATCATAAAATTGGAATTTTAACAATTC 8032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18788431936190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |