Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_004286.1 Length=6039 Score E Sequences producing significant alignments: (Bits) Value SEQ19609 111 6e-21 >SEQ19609 Length=132670 Score = 111 bits (122), Expect = 6e-21 Identities = 358/548 (65%), Gaps = 11/548 (2%) Strand=Plus/Plus Query 2444 ATCATTAAATATTATAGATGAGTTGCTTAAATATCAATGTAATGATGATGAAGGTTTAAT 2503 |||| || | || | ||||| ||| | |||| |||| | ||||| |||| | ||| Sbjct 8013 ATCAATAGAGGTTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATAAAAT 8072 Query 2504 AGTAGAATTTCTCACTAATTTGGTCAATGTATTAGACCGTCGTATACCTAAGTTAAATGC 2563 | ||||| | | ||||||| ||| || |||| ||| || || |||| | Sbjct 8073 TTCAAAATTTTTAAATAATTTGTATAATATAATAGATAAAAATATTCCAAAAAAAAATAC 8132 Query 2564 TTTCCTTGTAATGTCTCCTCCGAGTGCTGGTAAAAATTTCTTTTTTGATATGATTTTTGG 2623 | | || || | || || || | ||||||||||||||| |||||||||| ||| | Sbjct 8133 TATATTTATATTATCACCACCTAATGCTGGTAAAAATTTTTTTTTTGATA-CTTTTATTC 8191 Query 2624 ATTATT-ATTATCTTATGGACAACTTGGACAAGCTAATAGACATAACTTATTTGCTTTTC 2682 | |||| ||| || ||| ||| ||||| | ||||||| || || |||| | || Sbjct 8192 ACTATTGTTTAAATTTTGGTCAAGTTGGAAATTTTAATAGATATTGCTCATTTCCATTAA 8251 Query 2683 AAGAAGCTCCGAATAAACGTGTACTTCTATGGAATGAACCAAACTATGAAAG--TTCTTT 2740 ||| | ||||||| || || ||||||||||||| | ||| | || |||| Sbjct 8252 TGGAATGTGTTGATAAACGAATAATTTTATGGAATGAACC--ATTATTAGAGCCTTCTGC 8309 Query 2741 AACTGATACAATTAAAATGATGTTTGGAGGAGACCCATATACTGTTAGAGTTAAGAATCG 2800 ||||| ||| | |||||| | || ||||| || | |||| | ||||||| || | Sbjct 8310 TACTGAAACATTAAAAATGTTATTCGGAGGTGATACTGTAACTGCAAAAGTTAAGTATTG 8369 Query 2801 TATGGATGCACATGTAAAACGCACTCCAGTTATTATACTTACTAATAACACTGTACCTTT 2860 || ||||| | ||| | || || ||||||| || ||||| || ||| Sbjct 8370 TAATGATGCTGTTATAATGAGAACACC---TATTATAATTTTATCTAACAATGATGTTTT 8426 Query 2861 TATGTATGAAACAGCTTTTGCTGATAGAATTATTCAATATAAATGGA-ATGCTGCGCCAT 2919 | |||| | ||||||| |||||| || |||||||||| || || | Sbjct 8427 TCCAAATGATATAGCTTTTCGGTCTAGAATGTTTACCTATAAATGGAGATCATG-TTTAA 8485 Query 2920 TCCTAAAGGAATACGAATTGAAACCACATCCAATGACATTTTTTCTTTTATTGAGTAAAT 2979 |||| || || || ||||||||||| | | | || || |||||| | |||| Sbjct 8486 AATTAAAAGATTATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAAAT 8545 Query 2980 ATAATATT 2987 |||||||| Sbjct 8546 ATAATATT 8553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19204166612664