Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_005341.1 Length=6034 Score E Sequences producing significant alignments: (Bits) Value SEQ19609 100 1e-17 >SEQ19609 Length=132670 Score = 100 bits (110), Expect = 1e-17 Identities = 347/536 (65%), Gaps = 9/536 (2%) Strand=Plus/Plus Query 2453 TTATTGATGAATTACTTAAATATCAATGTAATGATGATGAAGGATTAATTGTAGAATTTC 2512 || |||||||||| | |||| |||| | ||||| |||| |||| | ||||| Sbjct 8024 TTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATAAAATTTCAAAATTTT 8083 Query 2513 TTACTAACTTGGTCAATGTATTAGACCGTCGTGTACCTAAGTTAAATGCTTTTCTTGTAA 2572 | | ||| ||| ||| || |||| | | || || |||| || | || || Sbjct 8084 TAAATAATTTGTATAATATAATAGATAAAAATATTCCAAAAAAAAATACTATATTTATAT 8143 Query 2573 TGTCTCCTCCAAGCGCTGGTAAAAATTTTTTCTTTGATATGATTTTTGGCTTACTATTAT 2632 | || || || | ||||||||||||||||| ||||||| || || || ||| Sbjct 8144 TATCACCACCTAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCACTATTGTTTAA 8203 Query 2633 CTTATGGACAACTTGGTCAAGCTAATAGACATAACTTGTTTGCTTTTCAAGAAGCTCCTA 2692 || ||| ||| |||| | ||||||| || || ||| | || ||| | | Sbjct 8204 ATTTTGGTCAAGTTGGAAATTTTAATAGATATTGCTCATTTCCATTAATGGAATGTGTTG 8263 Query 2693 ATAAACGTGTATTATTATGGAATGAACCTAATTATGAGAG--TTCACTAACTGATACAAT 2750 ||||||| || | |||||||||||||| ||||| |||| ||| ||||| ||| | Sbjct 8264 ATAAACGAATAATTTTATGGAATGAACC--ATTATTAGAGCCTTCTGCTACTGAAACATT 8321 Query 2751 TAAAATGATGTTTGGAGGAGACCCATATACTGTTAGAGTTAAGAATCGTATGGATGCACA 2810 |||||| | || ||||| || | |||| | ||||||| || ||| ||||| Sbjct 8322 AAAAATGTTATTCGGAGGTGATACTGTAACTGCAAAAGTTAAGTATTGTAATGATGCTGT 8381 Query 2811 TGTAAAACGCACTCCAGTTATTATACTAACTAATAATACAGTACCTTTTATGTATGAAAC 2870 | ||| | || || |||| || || |||| ||| || |||| |||| | Sbjct 8382 TATAATGAGAACACCTATTATAATTTTATCTAACAATGATGT---TTTTCCAAATGATAT 8438 Query 2871 TGCTTTTGCTGATAGAATTATTCAGTATAAATGGA-ATGCTGCGCCATTCCTAAAGGATT 2929 |||||| |||||| || |||||||||| || || | |||| |||| Sbjct 8439 AGCTTTTCGGTCTAGAATGTTTACCTATAAATGGAGATCATG-TTTAAAATTAAAAGATT 8497 Query 2930 ATGAATTGAAACCACATCCAATGACATTTTTCCTTTTATTGAGTAAATATAATATT 2985 || || ||||||||||| | | | || | |||||| | |||||||||||| Sbjct 8498 ATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAAATATAATATT 8553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 19188171138224