Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_005341.1
Length=6034
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19609 100 1e-17
>SEQ19609
Length=132670
Score = 100 bits (110), Expect = 1e-17
Identities = 347/536 (65%), Gaps = 9/536 (2%)
Strand=Plus/Plus
Query 2453 TTATTGATGAATTACTTAAATATCAATGTAATGATGATGAAGGATTAATTGTAGAATTTC 2512
|| |||||||||| | |||| |||| | ||||| |||| |||| | |||||
Sbjct 8024 TTCTTGATGAATTGTTAAAATTCCAATTTTATGATAATGATCATAAAATTTCAAAATTTT 8083
Query 2513 TTACTAACTTGGTCAATGTATTAGACCGTCGTGTACCTAAGTTAAATGCTTTTCTTGTAA 2572
| | ||| ||| ||| || |||| | | || || |||| || | || ||
Sbjct 8084 TAAATAATTTGTATAATATAATAGATAAAAATATTCCAAAAAAAAATACTATATTTATAT 8143
Query 2573 TGTCTCCTCCAAGCGCTGGTAAAAATTTTTTCTTTGATATGATTTTTGGCTTACTATTAT 2632
| || || || | ||||||||||||||||| ||||||| || || || |||
Sbjct 8144 TATCACCACCTAATGCTGGTAAAAATTTTTTTTTTGATACTTTTATTCACTATTGTTTAA 8203
Query 2633 CTTATGGACAACTTGGTCAAGCTAATAGACATAACTTGTTTGCTTTTCAAGAAGCTCCTA 2692
|| ||| ||| |||| | ||||||| || || ||| | || ||| | |
Sbjct 8204 ATTTTGGTCAAGTTGGAAATTTTAATAGATATTGCTCATTTCCATTAATGGAATGTGTTG 8263
Query 2693 ATAAACGTGTATTATTATGGAATGAACCTAATTATGAGAG--TTCACTAACTGATACAAT 2750
||||||| || | |||||||||||||| ||||| |||| ||| ||||| ||| |
Sbjct 8264 ATAAACGAATAATTTTATGGAATGAACC--ATTATTAGAGCCTTCTGCTACTGAAACATT 8321
Query 2751 TAAAATGATGTTTGGAGGAGACCCATATACTGTTAGAGTTAAGAATCGTATGGATGCACA 2810
|||||| | || ||||| || | |||| | ||||||| || ||| |||||
Sbjct 8322 AAAAATGTTATTCGGAGGTGATACTGTAACTGCAAAAGTTAAGTATTGTAATGATGCTGT 8381
Query 2811 TGTAAAACGCACTCCAGTTATTATACTAACTAATAATACAGTACCTTTTATGTATGAAAC 2870
| ||| | || || |||| || || |||| ||| || |||| |||| |
Sbjct 8382 TATAATGAGAACACCTATTATAATTTTATCTAACAATGATGT---TTTTCCAAATGATAT 8438
Query 2871 TGCTTTTGCTGATAGAATTATTCAGTATAAATGGA-ATGCTGCGCCATTCCTAAAGGATT 2929
|||||| |||||| || |||||||||| || || | |||| ||||
Sbjct 8439 AGCTTTTCGGTCTAGAATGTTTACCTATAAATGGAGATCATG-TTTAAAATTAAAAGATT 8497
Query 2930 ATGAATTGAAACCACATCCAATGACATTTTTCCTTTTATTGAGTAAATATAATATT 2985
|| || ||||||||||| | | | || | |||||| | ||||||||||||
Sbjct 8498 ATAAAAAAAAACCACATCCTTTATCTTGTTATCATTTATTAAAAAAATATAATATT 8553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19188171138224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |