Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_012685.1
Length=5759
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19609 82.4 3e-12
seq5851 80.6 1e-11
>SEQ19609
Length=132670
Score = 82.4 bits (90), Expect = 3e-12
Identities = 226/342 (66%), Gaps = 6/342 (2%)
Strand=Plus/Plus
Query 2220 GAAGACTTTTTAAAATTTCAATTTGAGGATAACGACGAAAAAATCACTCAATTTTTAGTA 2279
|| || || |||||||| |||||| | ||||| || | ||||| | ||||||||
Sbjct 8029 GATGAATTGTTAAAATTCCAATTTTATGATAATGATCATAAAATTTCAAAATTTTTAAAT 8088
Query 2280 GATTTAATTGATGTACTTGATAAACGAGTTCCAAAACAAAATGCTTTTGCAGTAATTTCG 2339
|||| | || || | |||||| |||||||| ||||| || | || | ||
Sbjct 8089 AATTTGTATAATATAATAGATAAAAATATTCCAAAAAAAAATACTATATTTATATTATCA 8148
Query 2340 CCACCTAGTTCAGGCAAAAATTTTTTCTTTGACATGATTATGGCAAT-TTGTTTAAACTA 2398
||||||| | | || ||||||||||| ||||| | |||| || | ||||||||| |
Sbjct 8149 CCACCTAATGCTGGTAAAAATTTTTTTTTTGATACTTTTAT-TCACTATTGTTTAAATTT 8207
Query 2399 TGGACAATTAGGACAAGCAAACAGACATAATTTGTTTGCATTTCAAGAAGCTCCCAATAA 2458
||| ||| | ||| | || ||| || | ||| |||| ||| | ||||
Sbjct 8208 TGGTCAAGTTGGAAATTTTAATAGATATTGCTCATTTCCATTAATGGAATGTGTTGATAA 8267
Query 2459 AAGATTATTACTTTGGAATGAACCAAACTATGAAAGCGCAATG--ACAGATACAATAAAA 2516
| || || | | ||||||||||| | ||| | ||| || || || ||| |||||
Sbjct 8268 ACGAATAATTTTATGGAATGAACC--ATTATTAGAGCCTTCTGCTACTGAAACATTAAAA 8325
Query 2517 ATGATGATGGGCGGAGATCCATATACTGTAAGAGTAAAATAT 2558
||| | | || || ||| | |||| || ||| || |||
Sbjct 8326 ATGTTATTCGGAGGTGATACTGTAACTGCAAAAGTTAAGTAT 8367
>seq5851
Length=40579
Score = 80.6 bits (88), Expect = 1e-11
Identities = 137/195 (70%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 2202 GAATCGTTTGCTATATTAGAAGACTTTTTAAAATTTCAATTTGAGGATAACGACGAAAAA 2261
||||| || ||| ||||| || || ||||||||||||||| | |||||||| || ||
Sbjct 28685 GAATCTATTAATATTTTAGATGAATTATTAAAATTTCAATTTTATGATAACGATGATCAA 28626
Query 2262 ATCACTCAATTTTTAGTAGATTTAATTGATGTACTTGATAAACGAGTTCCAAAACAAAAT 2321
|| || |||||| | | ||| | | || | |||||||| | |||| || |||||
Sbjct 28625 ATATCTTAATTTTCAAAAAATTGATATAATATTATTGATAAAAGTATTCCTAAGAAAAAT 28566
Query 2322 GCTTTTGCAGTAATTTCGCCACCTAGTTCAGGCAAAAATTTTTTCTTTGACATGATTATG 2381
|| | || | || ||||| | | | || ||||| ||||| ||||| | ||||
Sbjct 28565 ACTATGTTTATATTATCTCCACCAAATGCTGGAAAAAAATTTTT-TTTGATACATTTAT- 28508
Query 2382 GCAATT-TGTTTAAA 2395
|| || ||||||||
Sbjct 28507 ACATTTCTGTTTAAA 28493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 18311763051720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |