Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_023844.1 Length=2220 Score E Sequences producing significant alignments: (Bits) Value seq14893 199 6e-48 >seq14893 Length=1640 Score = 199 bits (220), Expect = 6e-48 Identities = 161/192 (84%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 1642 TCTCGACCATCAACATCTCCACCAATAAACGAGATTCCTCCTGGTGACTCATACACGGGA 1701 |||||||||||||||||||| |||| ||| |||||||| || | |||||| |||||| Sbjct 1450 TCTCGACCATCAACATCTCCGCCAACAAATTCGATTCCTCGCGGGGTCTCATAGACGGGA 1509 Query 1702 GGAACTGA-TGCAAACCGCCAATCGGCGTATTTGGCCAATTGCCCGTAATTGCAAGCAGC 1760 || ||| ||||| | ||| |||||||| ||||||| ||||||||| |||||||| Sbjct 1510 GG-CTTGACCGCAAATCTCCATTCGGCGTACTTGGCCAGCTGCCCGTAAGAACAAGCAGC 1568 Query 1761 AGCCTTGGGATCCAGGTGATGAACCAGTTCCCAAAAATGGTCTCGATCGCGCGCATTCGT 1820 || |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| Sbjct 1569 AGTCTTGGGATCCAGGTGATGAACCAGTTCCCAAAAATGGTCTCGGTCGCGTGCACACGT 1628 Query 1821 GATTTCAGCCCA 1832 ||| |||| ||| Sbjct 1629 GATCTCAGTCCA 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6992734970216