Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_009987.1 Length=7870 Score E Sequences producing significant alignments: (Bits) Value seq854 140 2e-29 >seq854 Length=133846 Score = 140 bits (154), Expect = 2e-29 Identities = 153/202 (76%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 5559 AAATTCAGG-TTATGTTTTTGGTG---GTGATTTACAATCAAAATATGGTTTACAATACA 5614 ||| | ||| |||||||||| || || ||||| || |||||||||||| | || | Sbjct 89372 AAAATAAGGATTATGTTTTTAATGAAAGTCATTTAAAAAACAAATATGGTTTAGATTATA 89431 Query 5615 AGAAAATTGAAGAACAAAAAATCGGTTACAATGTTTTTGAATTGCAAGCTCAAAAAGAGA 5674 | || |||||| | ||||||| || ||| ||||| |||||| | |||||||||||||| | Sbjct 89432 AAAATATTGAAAAGCAAAAAAWCGATTATAATGTCTTTGAACTACAAGCTCAAAAAGAAA 89491 Query 5675 ATGATATGTACCGATATTATGATTTTAATTTTGGGATTTATAATTGACAAGAGATAAATA 5734 |||| | || |||||| | ||||||||| || |||||||| | |||||| || |||| Sbjct 89492 ATGACGTTTATAAATATTACGGTTTTAATTTAGGAATTTATAACTAACAAGAAATTAATA 89551 Query 5735 GTGGTGGTTTATTTCCTGATAA 5756 | || || || |||| ||| Sbjct 89552 ACGAAGGATTGTTCCCTGTTAA 89573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25065208142336