Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_004286.1
Length=6039
Score E
Sequences producing significant alignments: (Bits) Value
seq11045 152 2e-33
>seq11045
Length=5519
Score = 152 bits (168), Expect = 2e-33
Identities = 293/422 (69%), Gaps = 24/422 (6%)
Strand=Plus/Plus
Query 2588 TGCTGGTAAAAATTTCTTTTTTGATATGATTTTTGGATTATTATTATCTTATGGACAACT 2647
||| |||||||||||||||||||||| | || ||||| ||| | ||| |||||
Sbjct 2751 TGCCGGTAAAAATTTCTTTTTTGATACATTATTAACATTATGTTTAAATCTTGGGCAACT 2810
Query 2648 TGGA----CAAGCTAATAGACATAACTTATTTGCTTTTCAAGAAGCTCCGAATAAACGTG 2703
|| ||| | ||| | |||| || |||||||||||| ||| | || |
Sbjct 2811 GGGCACTGCAAACAAATCAA-ATAATTT---TGCTTTTCAAGATGCTGCCAACCGTAGAA 2866
Query 2704 TACTTCTATGGAATGAACCAAACTATGAAAGTTCTTTAACTGATACAATTAAAATGATGT 2763
| ||||||||||||| || || |||||| | || ||| | |||| |||
Sbjct 2867 TTATTCTATGGAATGAGCCGAATTATGAATCAAGCATGACAGATTATTTGAAAACTTTGT 2926
Query 2764 TTG---GAGGAGACCCATATACTGTTAGAGTTAAGAA-TCGTATGGATGCACATGTAAAA 2819
||| |||||||| | | ||||||||||||| | | || || | ||||||||
Sbjct 2927 TTGAAGGAGGAGACACCAAG---GTTAGAGTTAAGATGTTGGGTG-ATACTCATGTAAAG 2982
Query 2820 CGCACTCCAGTTATTATACTTACTAATAA-CACTGTACCTTTTATGTATGAAACAGCTTT 2878
| || || |||| |||||||||||||| ||| ||| ||||||| || |||||
Sbjct 2983 AGAACACCTATTATAATACTTACTAATAATCAC-GTAAATTTTATGAGCGATGATGCTTT 3041
Query 2879 TGCTGATAGAATTATTCAATATAAATGGAATGCTGCGCCATTCCTAAAGGAATACGAATT 2938
| |||||||||| || ||||||||||| |||| || || || || || || ||||
Sbjct 3042 TAAAGATAGAATTAAGCAGTATAAATGGAAAACTGCACCTTTTCTGAAAGATTATAAATT 3101
Query 2939 GAAACCACATCCAATGACATTTTTTC---TTTTATTGAGTAAATATAATATTACATTTTA 2995
|||||| ||||| || ||||||||| ||||||| |||||||| || | |||||
Sbjct 3102 AAAACCATATCCATTGTCATTTTTTCAAATTTTATT---AAAATATAAAATAAAGTTTTA 3158
Query 2996 AT 2997
||
Sbjct 3159 AT 3160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 19196497588068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |