Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26] 60,629 sequences; 109,181,683 total letters Query= NC_004289.1 Length=5380 Score E Sequences producing significant alignments: (Bits) Value seq50774 78.8 3e-11 >seq50774 Length=143 Score = 78.8 bits (86), Expect = 3e-11 Identities = 89/117 (76%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1010 CACCTCCTAACGAAAGACCTAATTGGGAAAGGTTAAACGAAGGACAAAGACGATACGCTT 1069 ||||||| || |||||||| |||||| ||| | || ||||| ||||| || |||||| Sbjct 2 CACCTCCAAATGAAAGACCGAATTGGCAAAATATGAATGAAGGTCAAAGGCGTTACGCTA 61 Query 1070 GGGAACAATATAATTTGGCGCGAGTTCGTAGAGGTGAAAAATTTACATC-TCCTGTT 1125 ||||||||| || | || | |||||||||||| |||| | ||| ||||||| Sbjct 62 TGGAACAATACAAGCTTGCACTTGTTCGTAGAGGT-TTAAATATTGATCATCCTGTT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17092657829825