Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triops_20cancriformis_20[genbank_20GCA_5F000981345.1_202015-03-26]
60,629 sequences; 109,181,683 total letters
Query= NC_005041.2
Length=5335
Score E
Sequences producing significant alignments: (Bits) Value
seq17592 80.6 9e-12
>seq17592
Length=2661
Score = 80.6 bits (88), Expect = 9e-12
Identities = 274/416 (66%), Gaps = 12/416 (3%)
Strand=Plus/Minus
Query 2065 ACACTTTGGAATGTAATATTCCAAAACGTAATTGCTTTGTAGTT-TGTAGTCCACCTAGT 2123
||| ||| ||| | || ||||||||| | || | || | | ||| | |||||| ||| |
Sbjct 1832 ACATTTTAGAACGCAAAATTCCAAAA-GCAAATACTATTTTGTTGTTTAGTCCTCCTTCT 1774
Query 2124 GCTGGGAAAAACTTTTTCTTTGATGGTGTTAAGGATTATTATTTGAATTCAGGACAGATG 2183
||||||||| |||||| | || | | | | | ||| ||||||| ||||| ||
Sbjct 1773 AGTGGGAAAAATTTTTTCATGGACGTTTTCATTAACTATCTTTTGAATAGGGGACA-ATT 1715
Query 2184 AACAATC-CTAATAAATATAATCAATTTGCATATCAGGATTGCCATAA-TAGAAGGATTA 2241
| || |||| ||| ||| | ||||||| ||| ||| || |||| |||| | | |
Sbjct 1714 AGGAAGAGCTAACAAAACTAACAATTTTGCATTTCAAGAT-GCAATAAATAGACGAGTAA 1656
Query 2242 TTATATGGAATGAACCTAATTATGAACCAAGGGAAATGGAGAACTTAAAAATGCTGTTTG 2301
|| ||||| |||| || | || |||| | | | | || | || |||||||| ||
Sbjct 1655 TTTTATGGGATGAGCCAAGTTTTGAATTAGGTGCTTTAGAACAATTGAAAATGCTTACTG 1596
Query 2302 CTGGTGATAATTTGTCTGCCAATGTAAAATGTAAGCCTCAGGCAAATGTAAAACGAACAC 2361
||||| | || || || |||||||| || || ||| | |||| | ||| |
Sbjct 1595 GTGGTGGTGATATGAATGTTAATGTAAAGTGCAAAGAACAGCAACATGTTTACAAAACCC 1536
Query 2362 CTGTTATTGTGTTGACCAATTCACTGCCAA---ATTTTTGTCAACAAACAGCATTTAATG 2418
|||| || | || ||||| || | |||| | || || | | |||| |||| |
Sbjct 1535 CTGTCATAATTTTAACCAA--CAATTCCAATGAAATTATGACTTTAC-CAGCTTTTAGAG 1479
Query 2419 ATCGTGTAATAACGTATCATTGGACTCAGGCTACATTTTTGAAGGACTACAATAAA 2474
| ||||| | | | | |||| | ||| ||||||||||| | ||| |||||
Sbjct 1478 ACCGTGTTAAACAATTTGTGTGGAAAGAAGCTCCATTTTTGAAGCAGTACGATAAA 1423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 16948753320500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |