Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_001954.1 Length=8454 Score E Sequences producing significant alignments: (Bits) Value seq31895 506 1e-139 >seq31895 Length=1337 Score = 506 bits (560), Expect = 1e-139 Identities = 479/599 (80%), Gaps = 13/599 (2%) Strand=Plus/Plus Query 5590 ATCAGCATGTGGACATCATCGTACGTCTCCGTTACTTTC-TTTAAGTTCCTCGCCCCAAA 5648 |||||||||||||| | |||| || || ||||||||||| ||||||| || ||||| Sbjct 3 ATCAGCATGTGGACGTGATCGGAC-TCACCGTTACTTTCCTTTAAGTCA---GCGCCAAA 58 Query 5649 ATCACGGCAGCACTTCTGCCTGCATACTGATGAAATGGCTGCACAGTGTAACTCTCCCAG 5708 ||||||||| ||||| ||||||||||||||||| || ||| |||||| || | || Sbjct 59 ATCACGGCAT-ACTTCA-CCTGCATACTGATGAAA-GGAGGCATAGTGTAGATCGCTGAG 115 Query 5709 TATCTTTCGACGGTATTTTGTTACAAAGACGAAGATGAACATGCAAAAGGAAGGCAGCAT 5768 || || | || ||||| || ||||| |||| ||| ||||||||||||||| ||||||| Sbjct 116 AATTTTCCTCCGATATTTGGTCACAAAAACGA-GATTAACATGCAAAAGGAAAGCAGCAT 174 Query 5769 GTCTTGAACGATTGATTTTATATTTTTGCATTGAGGTTGGCCGTAAAAGCAGTAATATTG 5828 |||||||||||||||||||||||||||||||||| || ||| | | || ||| ||| | Sbjct 175 GTCTTGAACGATTGATTTTATATTTTTGCATTGAAATTAACCGGATATGCGGTAGTATAG 234 Query 5829 CAAGAAAATCTAGCTACACACTGAATGATGATGCTAATCCTGAAAGCCTACAAATTCAGA 5888 | | ||| || |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 235 TGATATAATTTA-CTACACACTGAACAATGATGCTAATCCTGAAAGCCTACAAATTCAGA 293 Query 5889 CTGGAACCAACGCCTGAACAGTCGCAGCGTTTGCGGCAGTTATGCGGTTGCGCCCGTTTT 5948 || ||||||| || ||||||||||||||||||||| | ||||| ||||| |||||| Sbjct 294 CTCGAACCAAACGAAGAGCAGTCGCAGCGTTTGCGGCAGCTGTGCGGATGCGCTCGTTTT 353 Query 5949 GTCTGGAATTTAGGTCTTGCGGAGACAAAGCGCATACTTGACTCAGGCGAAAAGTTACCT 6008 ||||||||| || || || |||||| | ||||| ||||| || |||| || ||||| Sbjct 354 ATCTGGAATTACGGGCTGGCAGAGACACAACGCATTCTTGAATCCGGCGGTAAACTACCT 413 Query 6009 TCGGCTTTCGAGTTGAACCGGAGTGATTACAGTGTGGaaaaaaaTGCCGGAATACATCTT 6068 || || || || ||||||||| || | ||||| ||||||||||| ||||| | ||| Sbjct 414 TCAGCGTTTGAACTGAACCGGA-TGCTCACAGTCTGGAAAAAAATTCCGGAGCATGCCTT 472 Query 6069 CTTACAGGATGCCTATACCGACAATCTGCAACAAAAGCTGAAAGACCTGCATACCGCATG 6128 | ||||||||||| ||||| ||||| || || ||||| |||||||||||| ||||| Sbjct 473 TCTGCAGGATGCCTACACCGATAATCTTCAGCAGAAGCTCAAAGACCTGCATGGTGCATG 532 Query 6129 GAAACGTTGTTTTGATAAAAAGCTCGCAGCTAAGGCTCCGGTATGGAAACGAAAAAATG 6187 ||||||||| |||||||| || || ||||| || || || |||| || ||||||||| Sbjct 533 GAAACGTTGCTTTGATAAGAAACTAGCAGCAAAAGCACCTGTATTTAA--GAAAAAATG 589 Score = 497 bits (550), Expect = 6e-137 Identities = 529/696 (76%), Gaps = 32/696 (5%) Strand=Plus/Plus Query 6308 GTAAAATCAAAAATGCGACAATCAGTCAGTTAGCGGGACAGTGGTATATCTCGTTTCAGG 6367 |||| || ||||| || || |||| ||| || ||||| |||||||| |||||||||| Sbjct 601 GTAAGATTAAAAACGCAACCGTCAGCCAGCACGCCGGACACTGGTATATATCGTTTCAGG 660 Query 6368 TTGAAATTGAAACGGCAGAACCAAATCACACA-AGCA-CAACGATAGTCGGTCTGGATGC 6425 | || |||||||| | || | | || || | || ||||||| | ||||||||||| Sbjct 661 TCGAGATTGAAACCGAAGTGC--ATTCGCATGTATCAGCAACGATGATTGGTCTGGATGC 718 Query 6426 TGGCGTGGCTAAACTCGCCACGCTGTCAGATGGCACAGTCTTTGAACCTGTAAACAGTTT 6485 || | | ||||| ||||| ||||||| |||| || ||||| || || ||||| || Sbjct 719 AGGGATAACAAAACTGGCCACATTGTCAGACGGCAAGGTATTTGAGCCGGTCAACAGCTT 778 Query 6486 TCAGAAAAAC----CAGAAGAAGCTGGCGAGACTTCAGCGACAGTTAAGCCGCAAGGTCA 6541 | ||||| ||| | || ||||| | |||||| || | ||||||||| || |||| Sbjct 779 T----AAAACGCGACAGGAAAAACTGGCAAAACTTCAACGCCGGTTAAGCCGGAAAGTCA 834 Query 6542 AATTCAGCAACAACTGGCAGAAGCAGAAACGCAAAATACAGTGTCTGCATTCCCGTATCG 6601 |||||||||| |||||| |||| ||||| || || || ||| || |||| || ||||| Sbjct 835 AATTCAGCAATAACTGGAAGAAACAGAAGCGAAAGATCCAGCGTTTGCACTCAGATATCG 894 Query 6602 CAAATATCCGCAGAGACTACCTTCATAAAGTCACAACGACCGTCAGCAAAAACCACGCAA 6661 | |||||||| | ||||||||||||||||||||| || |||||||||||||||| | Sbjct 895 CCAATATCCGTAAAGACTACCTTCATAAAGTCACCACTGAAATCAGCAAAAACCACGCGA 954 Query 6662 TGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCA 6721 || | ||||||||||||||||||||||| |||||||| || || ||| ||||||| || Sbjct 955 TGGTCGTCATTGAGGATTTGAAGGTCAGTAACATGTCGAAATCGGCAAAAGGTACGG-CA 1013 Query 6722 G-CCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAG 6780 | |||| || || || ||| || |||||||| || ||||| ||||||||||||||| Sbjct 1014 GAGCAGCACGGACGAAACGTCAAAGCCAAATCAGGCTTGAACCGCTCGATACTGGATCAG 1073 Query 6781 GGCTGGTATGAAATGCGCCGCCAGCTTGAGTACAAACAGCTCTGGCGTGGAGGTCAGGTG 6840 ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||| Sbjct 1074 GGCTGGTATGAAATGCGTCGTCAGCTTGAGTATAAGCAGCTCTGGCGTGGAGGTCAGGTA 1133 Query 6841 CTTGCTGTTCCGCCAGCGTACACAAGCCAGCGTTGCGCGTGCTGTGGTCATACAGCGAAA 6900 | || | || || || || |||||| ||||||||||||| Sbjct 1134 TTAGCAATACCTCCGGCATA------------------TNGCTGTGATCATACAGCGAAA 1175 Query 6901 GAAAACCGCCTGTCACAAAGTCAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCC 6960 ||||| || | | | || || ||||| ||| | || |||||||| ||||||||| Sbjct 1176 GAAAATCGGCCGACGCAGAGCAAATTCGAATGTCTCAAGTGCGGATATACCGCGAACGCC 1235 Query 6961 GATGTAAATGGCGCTCGTAACATTTTAGCGGCGGGG 6996 |||||||| ||||||||||||||||||||||| ||| Sbjct 1236 GATGTAAACGGCGCTCGTAACATTTTAGCGGCAGGG 1271 Score = 100 bits (110), Expect = 2e-17 Identities = 59/60 (98%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 7069 TCAG-CCGTCACCCACTAATGGGAATCCCCCTCCTGAGTCACGAAGTGCGAAGGTGGGGG 7127 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1278 TCAGACCGTCACCCACTAATGGGAATCCCCCTCCTGAGTCACGAAGTGCGAAGGTGGGGG 1337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 26917310330304