Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_005041.2 Length=5335 Score E Sequences producing significant alignments: (Bits) Value seq35525 102 3e-18 >seq35525 Length=2175 Score = 102 bits (112), Expect = 3e-18 Identities = 158/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 2114 TCCACCTAGTGCTGGGAAAAACTTTTTCTTTGATGGTGTTAAGGATTATTATTTGAATTC 2173 |||||||| |||||| ||||| ||||| |||||| | ||| |||||| ||| |||| Sbjct 1871 TCCACCTAATGCTGGAAAAAATTTTTTTTTTGATACTTTTATTCATTATTGTTTAAATTT 1930 Query 2174 AGGACAGATGAACAATCCTAATAAATATAATCAATTTGCATATCAGGATTGCCATAATAG 2233 ||||| | ||| ||||| |||| | |||| ||| ||| || |||| Sbjct 1931 CGGACAAGTAGGTAATTTTAATAGATATTGTTCATTTCCATTAATGGAATGTGTAAATAA 1990 Query 2234 AAGGATTATTATATGGAATGAACCTAATTAT--GAACCAAGGGAAATGGAGAACTTAAAA 2291 ||| |||||| |||||||||||||| |||| ||| || | || || | |||||| Sbjct 1991 AAGAATTATTTTATGGAATGAACCT--TTATTGGAATCATCAGCAACAGAAACTTTAAAA 2048 Query 2292 ATGCTGTTTGCTGGTGATA-ATTTGTCTGCCAATGTAAAAT 2331 ||| | |||| ||| |||| | ||| |||| || ||||||| Sbjct 2049 ATGTTATTTGGTGGAGATACAGTTG-CTGCAAAAGTAAAAT 2088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16947580404000