Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trupanea_20jonesi_20[genbank_20GCA_5F001014665.1_202015-05-28] 66,952 sequences; 97,281,263 total letters Query= NC_006555.1 Length=5039 Score E Sequences producing significant alignments: (Bits) Value seq35525 82.4 2e-12 >seq35525 Length=2175 Score = 82.4 bits (90), Expect = 2e-12 Identities = 201/299 (67%), Gaps = 8/299 (3%) Strand=Plus/Plus Query 2236 CCTAGTGCTGGTAAAAATTATTTTATAGACGCTATATTGTCCTT-TTATTTGAATACTGG 2294 |||| |||||| ||||||| |||| | || || | | || || || ||| ||| || Sbjct 1875 CCTAATGCTGGAAAAAATTTTTTTTTTGATACTTTTAT-TCATTATTGTTTAAATTTCGG 1933 Query 2295 AATTATATTAAACTTTAATAGATTTAGTCAATTTCCACTTATGGAAGCTGTTAATAGACG 2354 | || || |||||||||| | || ||||||| | |||||| ||| |||| | | Sbjct 1934 ACAAGTAGGTAATTTTAATAGATATTGTTCATTTCCATTAATGGAATGTGTAAATAAAAG 1993 Query 2355 TGTAAATGTATGGAATGAACCTAATTTTGAACCTGCAGCTTTAGACACCATAAAAATGTT 2414 | | | |||||||||||||| || ||| | |||| ||| || |||||||||| Sbjct 1994 AATTATTTTATGGAATGAACCTTTATTGGAATCATCAGCAACAGAAACTTTAAAAATGTT 2053 Query 2415 GTTAGCTGGTGATCCTTTAAAAGTAAATGTAAAATATCAAAAAGA-ACAATATT--TGCA 2471 || | ||| ||| | | | ||| ||||||||| ||| || | || | || Sbjct 2054 ATTTGGTGGAGATACAGTTGCTGCAAAAGTAAAATATTCAAATGATGCTGTAATAATG-- 2111 Query 2472 AAAAACTCCTATAATTGTAATGACAAACAAACCTGTATTTCCAAACGATTTAGCTTTTC 2530 | ||| ||| ||||||| | | || || ||| |||||||| ||| ||||||| Sbjct 2112 -AGAACACCTGTAATTGTCTTATCGAATAATGATGTTTTTCCAAATGATGCTGCTTTTC 2169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16001074026720