Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Varroa_20destructor_20[genbank_20GCA_5F000181155.2_202017-05-09]
20,448 sequences; 331,927,360 total letters
Query= NC_023421.1
Length=1378
Score E
Sequences producing significant alignments: (Bits) Value
seq20204 75.2 1e-10
>seq20204
Length=425557
Score = 75.2 bits (82), Expect = 1e-10
Identities = 161/237 (68%), Gaps = 9/237 (4%)
Strand=Plus/Minus
Query 625 TACTACAAACCACGCGGCGAATGGTGGGACGGATACACCGGACAAGAGGACGTGATCCTG 684
|| || ||| |||| || | |||||||||||||| | |||| | || ||| |
Sbjct 507 TATTATAAAACACGTGGTAATTGGTGGGACGGATATTC------AGAGCA-GTCATCATC 455
Query 685 GATGATTTCTACGGCTGGTTGAAGTTCGACGAACTTTTGAAAATATGTGACCGTTACCCG 744
|| |||||||| || ||| | || | ||||||||| | ||||||| ||| | || ||
Sbjct 454 GACGATTTCTATGGATGGATTAAATACGACGAACTACTCAAAATATCGGACAGATATCCT 395
Query 745 TATCGTGTCCCTGTGAAGGGCTCATTTGTGCAGTTTACTGCTAAGAGGATTTACATTACT 804
|| | || || || || || ||||| | |||| | || | |||| | ||||||
Sbjct 394 TACCAGGTACCGGTCAAAGGAGGATTTGCCAATTTTATTTCTGATTGGATATTCATTACC 335
Query 805 TCTAATGTAGCTGCTTCAGAGTGGTATCATTTTCAGGGCTACGACCCT-ACTGCGTT 860
|| ||| | || || ||||| |||||||| || ||| ||| | ||||| ||
Sbjct 334 TCAAATCAACACCCTAAGGATTGGTACCATTTTCAAGGATAC-ACCTTCACTGCTTT 279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4299865608192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |