Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ancylostoma_20duodenale_20[genbank_20GCA_5F000816745.1_202015-01-16] 69,981 sequences; 332,875,813 total letters Query= NC_001418.1 Length=5833 Score E Sequences producing significant alignments: (Bits) Value seq36384 87.8 7e-14 >seq36384 Length=1132 Score = 87.8 bits (96), Expect = 7e-14 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 4930 GGTTGGTTTCAGTACGTCTCAAAGCATGCTGCGCGGGGTGTGAATCACTACCAGCGTTCG 4989 || ||||| |||||| || || || ||||| || || || |||||||||||||||| Sbjct 598 GGCTGGTTCCAGTACCTCAGCAAACACGCTGCACGCGGCGTTTCTCACTACCAGCGTTCG 657 Query 4990 CCGGAAAACATACCGCCGCAGTGGCAGaaaaaaaCGGGCCGGATGTGGGGTAAGGTCGGT 5049 || ||| | || | |||||||||||| || || ||| | |||||||| | ||| Sbjct 658 ATCGACAACGTGCCAGAGGCGTGGCAGAAAAAGACCGGGCGGGTATGGGGTAAAGGCGGA 717 Query 5050 GAGTGGCCGGTGGTGGAAAAG 5070 || ||||| ||| ||||||| Sbjct 718 GATTGGCCAGTGCAGGAAAAG 738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 18539398755670