Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dirofilaria_20immitis_20[genbank_20GCA_5F001077395.1_202013-08-23] 25,560 sequences; 84,888,114 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq9745 764 0.0 >seq9745 Length=3682 Score = 764 bits (846), Expect = 0.0 Identities = 426/428 (99%), Gaps = 0/428 (0%) Strand=Plus/Minus Query 5488 ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCG 5547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 487 ACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCG 428 Query 5548 CTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCA 5607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 CTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCA 368 Query 5608 CGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTA 5667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 CGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTA 308 Query 5668 GTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTTGGGTGATGGTTCACGTAGTGGGC 5727 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 307 GTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTGGGC 248 Query 5728 CATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTG 5787 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 247 CATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTG 188 Query 5788 GACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGGCTATTCTTTTGATTTAT 5847 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 187 GACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATTTAT 128 Query 5848 AAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTA 5907 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127 AAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTA 68 Query 5908 ACGCGAAT 5915 |||||||| Sbjct 67 ACGCGAAT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20381337660640