Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_025791.1 Length=1755 Score E Sequences producing significant alignments: (Bits) Value seq3018 78.8 1e-11 seq1598 78.8 1e-11 >seq3018 Length=1138 Score = 78.8 bits (86), Expect = 1e-11 Identities = 120/170 (71%), Gaps = 11/170 (6%) Strand=Plus/Plus Query 859 GTTACTTGTTATCCATATGTATTTGCTGGTGAATTCCTCGAATCCTCCTTTAATCTGTAC 918 ||| |||||||| |||| |||||||||||| | | ||| |||||||| | || || Sbjct 778 GTTGCTTGTTATTACTATGGCTTTGCTGGTGAACTTTTGGAAGCCTCCTTTTGTTTGAAC 837 Query 919 CTTGTATGG----GTAGCGGTCCATTATTTTCAGCATTTCGTCATACTTTATCCAGCCGT 974 || |||||| | | ||| | | |||| ||||||| |||||| |||| Sbjct 838 CTGGTATGGTTTTGAATCGGCC----AGATTCATAATTTCGTTTGGAGATATCCAACCGT 893 Query 975 AGAAGTCGTCGATGATTACGCAATCATGTTGTTGATATCCGTCCCACCAT 1024 |||| |||||| || || | || |||||||| || |||||||||||| Sbjct 894 AGAA---GTCGATTATGACTAATTCTTGTTGTTGGTAGCCGTCCCACCAT 940 >seq1598 Length=1849 Score = 78.8 bits (86), Expect = 1e-11 Identities = 120/170 (71%), Gaps = 11/170 (6%) Strand=Plus/Plus Query 859 GTTACTTGTTATCCATATGTATTTGCTGGTGAATTCCTCGAATCCTCCTTTAATCTGTAC 918 ||| |||||||| |||| |||||||||||| | | ||| |||||||| | || || Sbjct 105 GTTGCTTGTTATTACTATGGCTTTGCTGGTGAACTTTTGGAAGCCTCCTTTTGTTTGAAC 164 Query 919 CTTGTATGG----GTAGCGGTCCATTATTTTCAGCATTTCGTCATACTTTATCCAGCCGT 974 || |||||| | | ||| | | |||| ||||||| |||||| |||| Sbjct 165 CTGGTATGGTTTTGAATCGGCC----AGATTCATAATTTCGTTTGGAGATATCCAACCGT 220 Query 975 AGAAGTCGTCGATGATTACGCAATCATGTTGTTGATATCCGTCCCACCAT 1024 |||| |||||| || || | || |||||||| || |||||||||||| Sbjct 221 AGAA---GTCGATTATGACTAATTCTTGTTGTTGGTAGCCGTCCCACCAT 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5506862725304