Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Necator_20americanus_20[refseq_20GCF_5F000507365.1_202013-12-20] 11,864 sequences; 244,075,060 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq68 150 1e-32 >seq68 Length=65501 Score = 150 bits (166), Expect = 1e-32 Identities = 240/338 (71%), Gaps = 16/338 (5%) Strand=Plus/Plus Query 7165 TCCAGCAAGTGCCGAAAGCGCAGAATGCTGACCCGGTCCGGCAGTCGGCTTATGCC-TC- 7222 || || | ||| || || |||||||| || | |||||||| || || || || Sbjct 64318 TCGAGAAGGTGACGGAACCGCAGAATCGTGCTCTCGTCCGGCAAACGCGCCATACCGTCG 64377 Query 7223 -CCAGCCCCGCGAATTGCCGATACAACGGCACGTCGTACAGCGCCTCTTCCATCGCCACG 7281 |||||||||| || | || |||| ||| ||||| || || ||||||||||||||| Sbjct 64378 TCCAGCCCCGCAAACTCACGGTACAGCGGTACGTCATAAAGTGCCTCTTCCATCGCCGGA 64437 Query 7282 TCCGTCAGCCCGAACCATTGCTGCAGAAAGTGGATGCGCAGCATCGTTTCGACTGGAAAC 7341 |||| ||||| ||||| ||||||| || || || |||||||||| | || |||||| Sbjct 64438 TCCGAAAGCCCAAACCACTGCTGCATGAAATGAATCTGCAGCATCGTCGCAACCGGAAAC 64497 Query 7342 GGCTTCCGACCCGTCGCCTTGACCGGCGCA---TGCGGCGCTATCAACGCCAAAAAACGC 7398 ||| || || || ||| ||| || | ||||| | ||||||| ||| ||| Sbjct 64498 GGCGGCCTTCCAGT---CTTACCCGTCGGATAGTGCGGTTCGATCAACG-CAATCAACCT 64553 Query 7399 CTGCCACGGCACCACACGTTCCATCTCATCCAGAAATACCTGCTTGCGCGTGCGTCGGTT 7458 | ||| ||||| || || ||||||||| |||||| || |||||||||||||| || Sbjct 64554 CGACCATGGCACGACGCGCCTCATCTCATCGAGAAATTCCCGCTTGCGCGTGCGT---TT 64610 Query 7459 GCTC---AGGTCCAGGCCAAGGTCGCTTTGTTTCATGG 7493 || || ||||||||||| || ||| |||||| Sbjct 64611 CGTCGAAAGATCCAGGCCAAGACCGAGCTGTGTCATGG 64648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27324352531840