Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20papillosus_20[genbank_20GCA_5F000936265.1_202014-11- 13] 4,703 sequences; 60,447,969 total letters Query= NC_007856.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq1527 1447 0.0 >seq1527 Length=4762 Score = 1447 bits (1604), Expect = 0.0 Identities = 2066/2882 (72%), Gaps = 121/2882 (4%) Strand=Plus/Minus Query 1169 AAGGGTGAACCCCTTAAATCCACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATAC 1228 || ||||| || |||||| | ||| ||||||||||| || ||||| || ||||||||| Sbjct 4759 AAAGGTGAGCCGCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATAC 4700 Query 1229 GTTAATAAAAAATCTGATGTTGACATAGCCGCAAAAGGCTTAGGGAATCAAAAATGGAAC 1288 ||||| ||||| || ||| | ||| | || || ||||| |||| | || |||||||| Sbjct 4699 GTTAACAAAAAGTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAAC 4640 Query 1289 GCTACATTAAAAACGCAGATGGCTCTTTTACCAAAGAAACTATTTCGAATTCGAATGAGC 1348 || ||||||| || || | || | || ||||| || || |||| |||||||| Sbjct 4639 AACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGC 4580 Query 1349 CGCAACTTCGGGATGAAACTACTCCCAATGACGACGCTGACCGCGGAGTGTTTAATCCAA 1408 |||||||||||||||||| | ||| ||||||| | ||| || ||||||| ||||||||| Sbjct 4579 CGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAA 4520 Query 1409 CTGACCCAAGTGGGTTACGACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAG 1468 || ||| | |||||||||||| ||| ||||||||| | || |||||||||||||| || Sbjct 4519 CTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAA 4460 Query 1469 AAAGAGCTACGATTGAGGCTGGCAAAGCAATCTGTAGCCGACGTTTTGGAGGCGCAACCT 1528 | |||| | |||||||||||| ||| |||||||||||||||||| |||||||||| Sbjct 4459 AGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCT 4400 Query 1529 GTGACGACCAATCTGCTAAAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAGC 1588 |||||||| |||||||| ||||| |||||| || || || || || | |||| | Sbjct 4399 GTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAAC 4340 Query 1589 CTACAGAGTTTTATCGCTTCAATGACGCAGAAATTAGCAAATACGGATATTTCTGATGAA 1648 || ||||||||||||||||| ||||||||||| ||| || | |||||||||||||||| Sbjct 4339 CTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAG 4280 Query 1649 ACTAAAAACTACGTTACTAATGCAGGAATTGCTGTTGCTGACTTACGACTTAAATCGAAG 1708 | ||||| || || ||| ||||||||| || |||| |||||| ||||||||||| Sbjct 4279 TCGAAAAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAG 4220 Query 1709 TGGACTGCTGGTGGAAAATGAAGAACTTCAATCTCAACTTAAAGAACTCGAGGGCGTCTT 1768 ||||||||||| ||||||||| || ||| | || ||| | |||||| |||| Sbjct 4219 TGGACTGCTGGCGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTT 4160 Query 1769 ACTTCGCAACCTTTCGCCATCATCTCAACG-TGGTAGCAAAGACTGACGCGCTTGATGAA 1827 |||| || |||||||||||||| || |||| | | |||| ||||||||| | ||||| Sbjct 4159 ACTTTGCGACCTTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAG 4101 Query 1828 GAAAAATGGCTCAATATGATGGGCGCTCTTCTTAAGGACTGGTTCCGCTATGAACAACAT 1887 || || ||||| |||||| | ||| | | | ||||||||||| | ||||| |||| Sbjct 4100 GAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACAT 4041 Query 1888 TTCGTACATGGCAAAGAATCAATGCTTGACATTCTAAATGAACGTGGCCTATTATCCACC 1947 || || ||||| | ||| || | |||||||| |||| || ||||| || ||| | Sbjct 4040 TTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTAT---CT 3984 Query 1948 TTGCCAAATG--GCTTAAC--TTACAAAGGAATCAAAAATGA---AAGCAAATGAGAACG 2000 | | ||| | | ||| || | | || || |||| ||| | ||| | Sbjct 3983 GAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAAT 3924 Query 2001 CAGTAGCCTTTCAAACCGCTATTGCCTCCATCAAACTTATTCAGGCATCTTCTGTTCTTG 2060 | ||| || || |||||| | ||||| || || || |||||||| ||| | ||| | | Sbjct 3923 CCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGG 3864 Query 2061 ACCTGACTGAGGACGATTTCGAATTCTTAACTCGTGACCGTGTATGGATTGCAACTGACC 2120 | | || || || |||||||| || | || || || || |||||||| ||||||| Sbjct 3863 ATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACC 3804 Query 2121 GCTCCCGTGCTCGCCGCGCTATTGAGGCTTGCGTTTATGGAACTCTGGACTTTGTGGGAT 2180 |||| |||||||| ||| ||||||||||||||||||| || ||||||||||| |||| Sbjct 3803 GCTCTCGTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGAT 3744 Query 2181 ACCCTCGCTTTCCTGCTCCTATTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATC 2240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 3743 ACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATC 3684 Query 2241 CCGTTAACATTCAAACGGCATGTCTTATTATGGAAGGCGCTGAATTCACCGAAAACATCA 2300 |||| |||||||||||||| ||||| || ||||||||||||||||| || |||||||| | Sbjct 3683 CCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTA 3624 Query 2301 TTAATGGTGTCGATGCCCCGGTTAAAGCCGCTGAACTCTTCGCGTTTACCTTGCGTGTAC 2360 ||||||| ||||| |||||||||||||||||| | |||||||||||||||||||||| Sbjct 3623 TTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTAC 3564 Query 2361 GCGCCGGAAACACTGAGCTTATTACTTACGCAGAAAACAATGCGCGTGAAAAACTGCGCG 2420 |||| ||||||||||| || ||||| |||||||| | || | |||| ||||| | || | Sbjct 3563 GCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTG 3504 Query 2421 CTCAAGGAGTGATG-GATGTC------TAAAAAATCTATTCGC---CGCTCTGGT----- 2465 | ||||||||||| ||||| ||||||| | | || ||| ||||| Sbjct 3503 CAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCC 3444 Query 2466 ----------------------GGCAAATCTAAAGGTGCTCGCCTCTGGTATGTTGGCGG 2503 ||||| |||||| ||||| || |||||||| || || Sbjct 3443 GCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGG 3384 Query 2504 CACACAATTCTAATCTCTAAGGGGCTTCGGCCCCTCTATTTAAGGATACAAAATGTCTAA 2563 |||||| |||| | |||||||||||||||| || || |||||| | |||||||| Sbjct 3383 TCAACAATTTTAATTGC--AGGGGCTTCGGCCCCT-TACTTGAGGATAAATTATGTCTAA 3327 Query 2564 CGTACAAACTTCCGCTGAACGTATTCCGCATGACCTCTCACATCTGGTATTCGAAGCTGG 2623 | |||||| ||| || ||||| ||||||||||| || ||||| | ||| ||||| Sbjct 3326 TATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGG 3267 Query 2624 TAAAATCGGACGCCTTAAAACTATCTCCTGGACTCCTGTTGTCGCTGGTGATTCTTACGA 2683 | | || || || |||| || || || ||||| ||| ||||||| || || | ||| Sbjct 3266 TCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGA 3207 Query 2684 AACTGAAATGGTAGGCGCTATTCGTCTTTCTCCTCTCCGTCGTGGTCTGGCTGTCGACTC 2743 | || || |||||| | ||||||||||| | |||||||| || ||| | ||||| Sbjct 3206 GATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTC 3147 Query 2744 TCGCGTCGACGTCTTTACTTTCTATATCCCTCATCGTCATGTCTATGGTCAACAATGGAT 2803 | || ||| | |||||||| ||| ||||||||||||| || |||||| |||| ||||| Sbjct 3146 TACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGAT 3087 Query 2804 TGACTTTATGAAGACTGGCGTTAACGCTACTCCTCTGGC-TCCGGTAACTTGTTCCTCTG 2862 | | || |||||| ||| ||||| || |||||||| | | | |||| | ||| Sbjct 3086 TAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAAC----ACTACTG 3031 Query 2863 GCT---GGGATTCTGCTGCCTATCTTGGCAC---TATCCCGTCAACTAATTTGAAGGTTC 2916 | | || ||| || | ||||||||| || ||| || ||| || | | Sbjct 3030 GTTATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAAT---AAAATCC 2974 Query 2917 CTAA--ATTCCTTCATCAATCTTATCTCAATATTTACAACAACTACTTTAAGCCGCCGTG 2974 |||| ||| || ||| |||| | ||||| || |||||||| ||||| ||||||| Sbjct 2973 CTAAGCATTTGTT--TCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTG 2916 Query 2975 GTCTAATGACCTCACCTATGCTAACCCATCTAATATGCCCGCTGAGGAT--TACAAATGG 3032 | ||||| ||| | ||||||| ||||| || | | ||| | | | Sbjct 2915 GATGCCTGACCGTACCGAGGCTAACC---CTAATGAGCTTAATCAAGATGATGCTCGTTA 2859 Query 3033 GGCGTTC--GTGTCGCTAACTTAAAATCTATCTGGACCGCGCCCCTTCCTCCTGATTCAT 3090 | ||| || || | || |||| | || ||||| || || ||||||||||| | | Sbjct 2858 TGGTTTCCGTTGCTGCCATCTCAAAAAC-ATTTGGACTGCTCCGCTTCCTCCTGAGAC-T 2801 Query 3091 TAAC-TAAGCAGGATATGACTACTGGCGCTACCA---CTATCGATATTATGGGCCTACAA 3146 | | | | | ||||| ||| |||||| |||| || |||||||| || ||| Sbjct 2800 GAGCTTTCTCGCCAAATGACGACT---TCTACCACATCTATTGACATTATGGGTCTGCAA 2744 Query 3147 GCTGCCTATGCTAAACTCCACACTGAACAGGAACGTGACTATTTCATGACTCGCTACCGC 3206 ||||| |||||||| | || ||||| || |||||||| || |||||| || |||| Sbjct 2743 GCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCAT 2684 Query 3207 GATATTATGAAAGACTTTGGCGGTCACACCTCCTACGACGGTGATAACCGTCCTCTGCTC 3266 ||| |||| ||||| ||| | ||||| || |||| ||| ||||||||| | || Sbjct 2683 GATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTT 2624 Query 3267 CTGATGCGCTCTGAATTTTGGGCCTCTGGCTATGACGTCGACGGTACTGACCAAACTTCA 3326 | ||||||||| | | ||||| ||||||||||| || || || ||||||||||| || Sbjct 2623 GTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCG 2564 Query 3327 TTGGGTCAGTTCTCTGGTCGCGTCCAACAAACCTTTAATCATAAAGTGCCTCGCTTCTAT 3386 || || ||||| |||||||| || ||||| |||| ||| ||| ||||| || |||| | Sbjct 2563 TTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTT 2504 Query 3387 GTTCCTGAGCATGGCGTAATTATGACTTTATCTGTTACTCGCTTCCCTCCTACT--CACG 3444 ||||||||||||||| || | ||| | | || ||| || || |||||| || Sbjct 2503 GTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACT 2444 Query 3445 AAATGGAAATGCACTATCTCGTCGGTAAGGAATCTCTGACTTATACTGACATTGCCTGTG 3504 ||| || || || || || || ||| | || |||||||||| || ||||| | | Sbjct 2443 AAA--GAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCG 2386 Query 3505 ACCCTGCTCT-TATGGCTAACCTGCCTCCGCGTGAAATTGAGGTAAAAGACCTCTTTCAC 3563 |||||| | | |||||| ||| |||| |||||||||||| | || || | || | Sbjct 2385 ACCCTGTTTTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGT 2327 Query 3564 TCTGCTGGT---ACTGGTAAATTCAAAATTGCCGAAGGTCAATGGTATCGTACTCAGCCT 3620 |||| || | || || || || ||||| || ||||| ||||||||| | |||| Sbjct 2326 TCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCT 2267 Query 3621 GACCGCGTTGCCTTCC--CTTATAACGCTCTTGACGGCTTCCCTTTCTATTC-TGAACTG 3677 ||| | ||| ||||| || |||||| |||||||| ||| |||| |||| | Sbjct 2266 TCGTATGTTTC--TCCTGCTTATCACCTTCTTGAAGGCTTCCCATTC-ATTCAGGAACCG 2210 Query 3678 CCGTCTAATGATATTCTCGAACGTGTACTTGTTCGAACTGATAACTATGATGAAATCTTC 3737 || ||| |||| | | ||||| |||||| |||| || | ||||| | ||| Sbjct 2209 CCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGATTATGACCAGTGTTTC 2150 Query 3738 CAGTCTATGCAACTTGCACACTGGAACATGCAAACTAAATTTAACACTACTGTATATCGT 3797 ||||| | || | || ||||| | || ||||||||| || || ||||| Sbjct 2149 CAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGC 2090 Query 3798 CATATGCCTACCACTCGTGATGGCATCATGA---CGTCATAAAA---------------C 3839 || |||| |||||||| ||| ||||||| ||| |||||| Sbjct 2089 AATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTT 2030 Query 3840 AAAACGTTGAACGGGTACAAATTTTAATTTGTGCCTGTTCAAGGTTGAACAAGCGAAGCG 3899 | |||| ||| |||| |||||||||||| |||| | |||||| ||||||||||| Sbjct 2029 ATAACGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCG 1970 Query 3900 CGTTAGCTAACTTACTTAAGGAAATT-CTCATGTTTCAAACTTATCTCTCTAAACATAAT 3958 || ||| | | ||| |||| || |||||||||| |||| | | ||| |||||| Sbjct 1969 CGGTAGGTTTTCTGCTT-AGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAAT 1911 Query 3959 TC 3960 || Sbjct 1910 TC 1909 Score = 179 bits (198), Expect = 1e-41 Identities = 658/1047 (63%), Gaps = 71/1047 (7%) Strand=Plus/Minus Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504 ||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || || Sbjct 1430 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 1373 Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564 |||| |||||||| | || ||| || || |||||| || || Sbjct 1372 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 1313 Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618 |||| |||||||| |||| || ||||| || ||||| |||| || |||| | Sbjct 1312 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 1259 Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678 ||||||||| ||||| || ||||| || |||||| ||| || | | | || | || Sbjct 1258 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 1199 Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734 | | | | || || | | | || | |||| |||| || | | | | | | || Sbjct 1198 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 1139 Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783 ||||| || | |||| |||| | | || | ||||| | ||| Sbjct 1138 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 1079 Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843 ||| |||| |||||| |||||||| |||||||||||| |||| || || || || || Sbjct 1078 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 1019 Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903 | ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| | Sbjct 1018 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 959 Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963 || ||||| || | ||| ||||| || ||| Sbjct 958 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 899 Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023 || ||||| | ||||| || || ||||| || Sbjct 898 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 839 Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083 ||| || ||||| ||||| || ||||| || | || || || |||| | || Sbjct 838 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 779 Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143 ||||| ||||| | |||||||| | || |||| ||||| || ||| || ||||| Sbjct 778 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 719 Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203 ||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| | Sbjct 718 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 659 Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263 |||| | ||||| ||||| | ||||| |||| |||| | || | Sbjct 658 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 612 Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323 | | | |||| | | || || | || || || Sbjct 611 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 581 Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383 | || || || |||||| | || |||||| | | ||| || |||||||| | || Sbjct 580 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 521 Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443 |||| ||||| ||| ||||||||||||| || |||||||||||||||| | ||||| Sbjct 520 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 461 Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470 || ||| | ||||| || |||| || Sbjct 460 CGGTAAAGCTGATGGTATTGGCTCTAA 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17442302738145