Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_021862.1
Length=8576
Score E
Sequences producing significant alignments: (Bits) Value
seq1011 105 4e-19
>seq1011
Length=14871
Score = 105 bits (116), Expect = 4e-19
Identities = 109/140 (78%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 6948 GCATCCACACCAATGTGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGG 7007
||||| ||||||||||| || |||||||| || |||||||| || ||||||||||||||
Sbjct 10245 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 10186
Query 7008 TGCATCTCTGGGTCACGCTTGCCGCT-GCCATTCTTGGTCGAACTGGGCGCGGCAATCAG 7066
|||||||| || || || |||| ||| |||||||| || ||||| || |||| |
Sbjct 10185 TGCATCTCCGGATCGCG-TTGCTGCTCTTTGTTCTTGGTAGAGCTGGGTGCCTCAATGAT 10127
Query 7067 CGAGGCGTCGACCACCGTGC 7086
| ||| || |||| ||||
Sbjct 10126 GGTGGCATCCACCAAAGTGC 10107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27326722279360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |