Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fasciola_20hepatica_20[genbank_20GCA_5F000947175.1_202014-12-01] 20,158 sequences; 1,275,107,963 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq13672 159 1e-35 >seq13672 Length=7351 Score = 159 bits (176), Expect = 1e-35 Identities = 115/133 (86%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 5813 CACTCACAACTAACTCGGCCTATTCTTTTGATTTATAAGGATTTTTGTCATTTTCTGCTT 5872 |||||| ||| ||||| ||||||||||||||||||||| ||||| | |||| || | Sbjct 3060 CACTCAACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCT 3001 Query 5873 ACTGGTTAAAAAATAAGCTGATTTAACAAATATTTAACGCGAAATTTAACAAAACATTAA 5932 | |||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||| Sbjct 3000 ATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAA 2941 Query 5933 CGTTTACAATTTA 5945 || |||||||||| Sbjct 2940 CGCTTACAATTTA 2928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20385775916064