Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_001420.2
Length=5577
Score E
Sequences producing significant alignments: (Bits) Value
seq20860 437 3e-119
>seq20860
Length=775
Score = 437 bits (484), Expect = 3e-119
Identities = 474/626 (76%), Gaps = 2/626 (0%)
Strand=Plus/Minus
Query 1313 CCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAACTGTTATCAATG 1372
|||||||| |||||||||| ||||| ||||| ||||| |||||| || | |||||
Sbjct 758 CCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATG 699
Query 1373 GCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTACGACGTGACCCCG 1432
| | ||||| |||| | | || |||| ||| | |||||||||||| ||| |||
Sbjct 698 ACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCG 639
Query 1433 TTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGGCTGGCAAAGAAA 1492
|||||| | || |||||||||||||| || | |||| | | || |||||||| |||
Sbjct 638 TTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTT 579
Query 1493 TCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGC 1552
|||| ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||
Sbjct 578 ACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGC 519
Query 1553 AATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACG 1612
|| || || || || | |||||||| ||||||||||||||||| ||||| |
Sbjct 518 GCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAG 459
Query 1613 AAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATT 1672
|| |||||| | |||||||||||||||| | ||||| || ||| | |||||||||
Sbjct 458 AAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATT 399
Query 1673 GCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAGGAAATTCA 1732
|| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 398 ACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCG 339
Query 1733 ATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCCATCATCTCAACG 1792
| || ||| | |||||| ||||||||||| |||||||||||||| || ||||
Sbjct 338 ACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACG 280
Query 1793 -TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATGTTAGGTGCTCTC 1851
| ||| ||||||||||||| | || |||||||| | | |||||| | || | ||
Sbjct 279 ATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC 220
Query 1852 CTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAATCAATGCTTGAC 1911
||||||||||||| | || || |||||| || ||||||| | | || | |||||
Sbjct 219 GTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC 160
Query 1912 ATACTGAAAGAACGTGGCCTATTATC 1937
|| | ||||| ||||| || ||||
Sbjct 159 ATTTTAAAAGAGCGTGGATTACTATC 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17728563248730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |