Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq20860 437 3e-119 >seq20860 Length=775 Score = 437 bits (484), Expect = 3e-119 Identities = 474/626 (76%), Gaps = 2/626 (0%) Strand=Plus/Minus Query 1313 CCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAACTGTTATCAATG 1372 |||||||| |||||||||| ||||| ||||| ||||| |||||| || | ||||| Sbjct 758 CCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATG 699 Query 1373 GCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTACGACGTGACCCCG 1432 | | ||||| |||| | | || |||| ||| | |||||||||||| ||| ||| Sbjct 698 ACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCG 639 Query 1433 TTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGGCTGGCAAAGAAA 1492 |||||| | || |||||||||||||| || | |||| | | || |||||||| ||| Sbjct 638 TTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTT 579 Query 1493 TCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGC 1552 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||||| Sbjct 578 ACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGC 519 Query 1553 AATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACG 1612 || || || || || | |||||||| ||||||||||||||||| ||||| | Sbjct 518 GCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAG 459 Query 1613 AAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATT 1672 || |||||| | |||||||||||||||| | ||||| || ||| | ||||||||| Sbjct 458 AAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATT 399 Query 1673 GCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAGGAAATTCA 1732 || |||| ||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 398 ACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCG 339 Query 1733 ATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCCATCATCTCAACG 1792 | || ||| | |||||| ||||||||||| |||||||||||||| || |||| Sbjct 338 ACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACG 280 Query 1793 -TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATGTTAGGTGCTCTC 1851 | ||| ||||||||||||| | || |||||||| | | |||||| | || | || Sbjct 279 ATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC 220 Query 1852 CTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAATCAATGCTTGAC 1911 ||||||||||||| | || || |||||| || ||||||| | | || | ||||| Sbjct 219 GTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC 160 Query 1912 ATACTGAAAGAACGTGGCCTATTATC 1937 || | ||||| ||||| || |||| Sbjct 159 ATTTTAAAAGAGCGTGGATTACTATC 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17728563248730