Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq20860 872 0.0 >seq20860 Length=775 Score = 872 bits (966), Expect = 0.0 Identities = 483/483 (100%), Gaps = 0/483 (0%) Strand=Plus/Minus Query 1 GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAA 424 Query 61 AAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 AAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGAC 364 Query 121 TGCTGGCGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 TGCTGGCGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTT 304 Query 181 GCGACCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 GCGACCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAG 244 Query 241 TGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 TGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTT 184 Query 301 CATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 CATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGAT 124 Query 361 GCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT 64 Query 421 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCG 4 Query 481 AAG 483 ||| Sbjct 3 AAG 1 Score = 527 bits (584), Expect = 2e-146 Identities = 292/292 (100%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 5095 CCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGA 5154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 CCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGA 716 Query 5155 TGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGG 5214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 715 TGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGG 656 Query 5215 GTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGAT 5274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 655 GTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGAT 596 Query 5275 TGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATC 5334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 595 TGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATC 536 Query 5335 TGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCA 5386 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 TGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCA 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17117564407065