Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_005131.2 Length=7118 Score E Sequences producing significant alignments: (Bits) Value seq7796 84.2 1e-12 >seq7796 Length=2204 Score = 84.2 bits (92), Expect = 1e-12 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 5449 GCGTCTAGCGTCGGGAGTGTCCGCGCCTTTGACTAGGCGGTAGAGGTGGGGCGTGGGCAG 5508 ||| |||||||| |||||| ||||||| | || | |||| |||| || || | |||| Sbjct 1226 GCGACTAGCGTCAGGAGTGCCCGCGCCCTATACCAAGCGGCTGAGGCGGTGCATTCGCAG 1285 Query 5509 GATCTTCGGCCG-TTGTCGCACGGCCAGTGCGGCTGGCGGGACCGAGCAGCGGGT 5562 | || |||| | ||| ||| |||| || |||||||||||| ||||| ||||||| Sbjct 1286 AA-CTCCGGCTGGTTGACGCGCGGCTAGCGCGGCTGGCGGGGCCGAGTAGCGGGT 1339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 22654728239368