Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_007817.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq20860 457 3e-125
>seq20860
Length=775
Score = 457 bits (506), Expect = 3e-125
Identities = 485/636 (76%), Gaps = 10/636 (2%)
Strand=Plus/Minus
Query 1307 CTGCTGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCAC 1366
|| || |||||||| | || | ||||| ||| ||||||||||| ||||| ||| |
Sbjct 764 CTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTC 705
Query 1367 ACAATGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTG 1426
||||||| | || || |||| |||||||||| ||| | |||| ||||||| |
Sbjct 704 ACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCG 645
Query 1427 ACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCA 1486
|| ||||||||| | || |||||||||||||| || | |||| | |||||||||||| |
Sbjct 644 ACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGA 585
Query 1487 AAGAAATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTC 1546
|| |||| ||||||||||||| |||||||||||||||||| |||||||| |||||
Sbjct 584 AAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTT 525
Query 1547 ATGCGCAATTTGACCCGTCAAA----TCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTC 1602
|||||| || || | ||| | || || ||||||||||||||||||||||||||
Sbjct 524 ATGCGCGCTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTC 469
Query 1603 AATGACAACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATAC 1662
||||| ||| |||||| | ||||||||||||||| | ||||| || ||||||
Sbjct 468 CATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAA 409
Query 1663 TGCAGGAATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATG 1722
|||||||||||| || || ||||||||||||||||||||||||||||| ||||||||
Sbjct 408 AGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATG 349
Query 1723 AAGAAATTCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCAT 1782
| |||||| | || ||| | ||||||||||||||||| || ||||||||||||
Sbjct 348 AGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCAT 289
Query 1783 CACCTGAACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCT 1841
|| || |||| | ||| |||| |||||||| | || ||||| || | || ||||||||
Sbjct 288 CAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCT 230
Query 1842 AGGTGCTCTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATC 1901
|| | || ||||||||||||| | || || |||||| || ||||||| | | ||
Sbjct 229 TGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTC 170
Query 1902 AATGCTTGACTTATTAAATGAACGTGGACTATTATC 1937
| ||||| | ||||| || |||||| || ||||
Sbjct 169 TCTTGTTGACATTTTAAAAGAGCGTGGATTACTATC 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17437459088565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |