Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_007856.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq20860 486 7e-134
>seq20860
Length=775
Score = 486 bits (538), Expect = 7e-134
Identities = 485/626 (77%), Gaps = 2/626 (0%)
Strand=Plus/Minus
Query 1319 CCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGGGATGAAACTACTCCCAATG 1378
|| ||||| || || |||| |||||||||||||||||||||||||| | ||| |||||
Sbjct 758 CCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATG 699
Query 1379 ACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGTGGGTTACGACGTGACCCCG 1438
|| | ||| || ||||||| ||||||||||| ||| | |||||||||||| ||| |||
Sbjct 698 ACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCG 639
Query 1439 TTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGCAA 1498
|||||| | || |||||||||||||| || | |||| | |||||||||||| |||
Sbjct 638 TTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTT 579
Query 1499 TCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGCGC 1558
|||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||
Sbjct 578 ACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGC 519
Query 1559 AATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTTTATCGCTTCAATGACGCAG 1618
|| || || || || | |||| ||| ||||||||||||||||| |||||||||
Sbjct 518 GCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAG 459
Query 1619 AAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTACGTTACTAATGCAGGAATT 1678
|| ||| || | |||||||||||||||| | ||||| || || ||| |||||||||
Sbjct 458 AAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATT 399
Query 1679 GCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGAACTTCA 1738
|| |||| |||||| |||||||||||||||||||||| ||||||||| || |||
Sbjct 398 ACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCG 339
Query 1739 ATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACCTTTCGCCATCATCTCAACG 1798
| || ||| | |||||| |||||||| || |||||||||||||| || ||||
Sbjct 338 ACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT-AACG 280
Query 1799 -TGGTAGCAAAGACTGACGCGCTTGATGAAGAAAAATGGCTCAATATGATGGGCGCTCTT 1857
| | |||| ||||||||| | ||||| || || ||||| |||||| | ||| | |
Sbjct 279 ATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTC 220
Query 1858 CTTAAGGACTGGTTCCGCTATGAACAACATTTCGTACATGGCAAAGAATCAATGCTTGAC 1917
| ||||||||||| | ||||| |||||| || ||||| | ||| || | |||||
Sbjct 219 GTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGAC 160
Query 1918 ATTCTAAATGAACGTGGCCTATTATC 1943
||| |||| || ||||| || ||||
Sbjct 159 ATTTTAAAAGAGCGTGGATTACTATC 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17437459088565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |