Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20diminuta_20[genbank_20GCA_5F000951255.1_202014-09-25] 13,910 sequences; 165,878,914 total letters Query= NC_021568.1 Length=1832 Score E Sequences producing significant alignments: (Bits) Value seq3405 105 8e-20 >seq3405 Length=9822 Score = 105 bits (116), Expect = 8e-20 Identities = 136/184 (74%), Gaps = 3/184 (2%) Strand=Plus/Plus Query 696 AAGCAAAGCTA-CAGGAGAAGATACCTACTACAAACCAAGAGGAGAATGGTGGGATGGAT 754 |||||||| || ||||||||| | |||||||||||| | ||| |||||||||| |||| Sbjct 8687 AAGCAAAGATAACAGGAGAAGCGATATACTACAAACCACGTGGAAAATGGTGGGACGGAT 8746 Query 755 ACTGTGGA-CAACCTAATGTGGTCATCGACGACTTTTATGGATGGATTAAATATGACGAA 813 | || | || || ||| | | | ||||||| || | |||| ||||||||| Sbjct 8747 A-TGAACAGCAGCCAAATATAATAACTGACGACTCCTACGCCTGGACACCATATGACGAC 8805 Query 814 CTTCTCAAAATTTGCGACCGATACCCCTACCGCGTCCCAGTCAAAGGAGGATACGAAAAC 873 || || ||||| ||| |||| | ||||||| | ||| | |||||||||||||||| Sbjct 8806 CTACTAAAAATACTGGACAGATATCACTACCGCCTACCAATTAAAGGAGGATACGAAATA 8865 Query 874 TTCT 877 |||| Sbjct 8866 TTCT 8869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5752749653880