Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenolepis_20microstoma_20[genbank_20GCA_5F000469805.2_202015-12- 11] 3,643 sequences; 182,136,974 total letters Query= NC_023866.1 Length=1784 Score E Sequences producing significant alignments: (Bits) Value seq35 84.2 2e-13 >seq35 Length=251576 Score = 84.2 bits (92), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 7/185 (4%) Strand=Plus/Plus Query 1024 TGTAATCCATATGCG--TCTGCTTGTAAATTCTTCGAACCCTCCTTTGACTTGTACCTTG 1081 ||| |||||||| || || ||| ||||| | | || ||||| | | | ||| | Sbjct 196465 TGTTATCCATATTCGCTTCGAGTTGAAAATT--TGATATCCACCTTTTATTGGCACCCTA 196522 Query 1082 TAGGGGTATCGGTCCATTATTTTCAGCATTTCGTCATATTTTATCCATCCATAGAAGTCG 1141 || || |||| ||| | ||||| || ||||| ||| |||||| || ||||||||| Sbjct 196523 TAAGGATATCTGTCGAGGATTTTTAGG---TCGTCGTATGGTATCCAACCGTAGAAGTCG 196579 Query 1142 TCTATGATGACGTTGTCCTGTTGATGGTAGCCGTCCCACCAGAGCCCTCTAGGTTTGTAG 1201 || || || | || |||||| | ||||| |||||||| |||| |||||||||| Sbjct 196580 TCAATAATAATATTAGGCTGTTGTTCATAGCCATCCCACCATTTGCCTCGAGGTTTGTAG 196639 Query 1202 TAAAT 1206 ||||| Sbjct 196640 TAAAT 196644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5599783241500