Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq26622 893 0.0 >seq26622 Length=4617 Score = 893 bits (990), Expect = 0.0 Identities = 908/1178 (77%), Gaps = 14/1178 (1%) Strand=Plus/Plus Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712 || |||||||||||||| || || | | | || |||| ||||| |||||||| |||||| Sbjct 2244 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 2303 Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772 |||||| | | || | | |||||||| ||||| || || |||| || |||| Sbjct 2304 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 2363 Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832 | || || || ||||| || | || || ||||| | ||| || |||||||||||| Sbjct 2364 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 2423 Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892 |||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 2424 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 2483 Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952 | |||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct 2484 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTA-- 2541 Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010 |||| | |||||| | ||||| || || |||||| ||||||| ||||||||| ||| Sbjct 2542 CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 2601 Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070 | |||||||| ||||| | ||| || | | || || ||||||||||||||| Sbjct 2602 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 2661 Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130 |||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| |||| Sbjct 2662 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 2721 Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190 | || |||| ||| | ||||| |||||| | || || || || |||||||||||| | Sbjct 2722 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 2781 Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250 |||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | | Sbjct 2782 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 2841 Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310 | ||||||||||||| ||||||||||||||| ||||| |||||||| | || | Sbjct 2842 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 2901 Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370 | |||||||| | || | ||||| ||| ||||||||||| ||||| ||| ||||| Sbjct 2902 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 2961 Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCC 1430 ||| | || || |||| |||||||||| ||| | |||| ||||||| ||| | Sbjct 2962 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGC 3021 Query 1431 CGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGA 1490 |||||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 3022 CGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAG 3081 Query 1491 AATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGC 1550 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||| Sbjct 3082 TTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGC 3141 Query 1551 GCAATTTGACCCGTCAA----ATCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATG 1606 || || || | || || || || |||||||||||||||||||||||||| ||| Sbjct 3142 GCGCTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATG 3197 Query 1607 ACAACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCA 1666 || ||| |||||| | ||||||||||||||| | ||||| || |||||| ||| Sbjct 3198 ACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCA 3257 Query 1667 GGAATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGA 1726 ||||||||| || || ||||||||||||||||||||||||||||| ||||||||| | Sbjct 3258 GGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAA 3317 Query 1727 AATTCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACC 1786 ||||| | || ||| | ||||||||||||||||| || |||||||||||||| | Sbjct 3318 AATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAAC 3377 Query 1787 TGAACG-TACTGGCAAAGACTGACGCTCTCGACGAGGA 1823 | |||| | ||| |||| |||||||| | || ||||| Sbjct 3378 T-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGA 3414 Score = 381 bits (422), Expect = 2e-102 Identities = 573/809 (71%), Gaps = 49/809 (6%) Strand=Plus/Plus Query 2212 TTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCTTATTATGGAAGGCGCCG 2271 |||||||||||||||||||||| ||||| || || || ||||| || ||||||||||| | Sbjct 3812 TTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTG 3871 Query 2272 AGTTCACCGAAAATATTATCAATGGTATTGACCAGCCAGTTAAGGCCGCTGAACTATTCG 2331 | || || ||||| ||||| ||||| | || | || ||||| ||||||||| | |||| Sbjct 3872 AATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCG 3931 Query 2332 CTTTTACCCTGCGTGTACGCGCCGGAAACACTGACCATGTTACACATGCAGAAACTAACG 2391 | |||||| ||||||||||||| |||||||||||| | |||| | |||||| |||| Sbjct 3932 CGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACG 3991 Query 2392 TACGTGAACAATTACGTGCTCAAGGAGTAATGTAATGGCTAAAGG--------------- 2436 | ||| || |||||||||| ||||||| |||||||| ||||||| Sbjct 3992 TGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGG 4051 Query 2437 CTCTCGTC---GGCGTTCGC---CGTCCCG-----CTC----------TAAAGGTGCTCG 2475 | |||| | | ||| ||| ||| || || |||||| ||||| Sbjct 4052 CGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCG 4111 Query 2476 CCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGCTTCGGCCCCTCTATTTA 2535 || |||||||| || || |||||| |||| | |||||||||||||||| || || Sbjct 4112 TCTTTGGTATGTAGGTGGTCAACAATTTTAAT--TGCAGGGGCTTCGGCCCCT-TACTTG 4168 Query 2536 AGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATTCCTAACGACCTTTCTCA 2595 |||||| | |||||||| |||||||| ||| || || || || | |||||||| || Sbjct 4169 AGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCA 4228 Query 2596 CCTCGTCTTCGAGGCTGGTAAAATCGGCCGTTTAAAAACTATCTCCTGGACTCCAGTTGT 2655 || | |||| |||||| | || || ||| | | || || || ||||| ||| | Sbjct 4229 TCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTAT 4288 Query 2656 CGCTGGCGACTCATTTGAAACTGAGATGGTAGGCGCTATTCGCCTTTCTCCACTCCGTCG 2715 |||||||||||| || || | || || |||||| | || ||||||||| | ||||| Sbjct 4289 CGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCG 4348 Query 2716 CGGCCTTGCCGTCGACTCTCGCGTGGATATCTTCTCTTTCTATATTCCGCATCGTCATAT 2775 |||||||| | |||||| || || || || |||| ||| | || |||||||| | Sbjct 4349 TGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGT 4408 Query 2776 CTATGGTCAAGAATTCATTGAATTCATGAAAGCTGGCGTTAATGCCACTCCTCTCGCACC 2835 |||||| || | | ||| | |||||||| | ||| |||||||||||||||||| | | Sbjct 4409 TTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGAC 4468 Query 2836 TGTTACTACTGCCTCTGGCT---GGGATGCTTCTGCCTATCTTGGCACTATTCCATCCTC 2892 ||||| |||| |||| | || | | || | ||||||||| ||| | ||| Sbjct 4469 TGTTAACACTG---CTGGTTATATTGACCATGCCGCTTTTCTTGGCACGATT-AACCCTG 4524 Query 2893 AAACC-TCAAGGTTCCTAAATTCTTACATCAAGGATACCTTAATATTTACAACAACTACT 2951 | ||| || | ||||| || ||| || || | ||||| || |||||||| | Sbjct 4525 ATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATT 4584 Query 2952 TTAAGCCACCGTGGGATG-CTGACCTTAC 2979 |||| | |||| ||||| |||||| ||| Sbjct 4585 TTAAAGCGCCGT-GGATGCCTGACCGTAC 4612 Score = 203 bits (224), Expect = 1e-48 Identities = 538/808 (67%), Gaps = 44/808 (5%) Strand=Plus/Plus Query 4138 TAATCAGGTCTTCTCCGTCTGTGCTCACATCACATCTGACGTGGACCCTAAATATATTGC 4197 ||||||||| | || || ||||| | || | | ||| | |||||||||| | |||| Sbjct 393 TAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC 452 Query 4198 GTGCCTCGTTCGCTTTGAGGTCACTGCTGGTACCACTCCTACCGCTATGCCTCCTGTCTA 4257 || | |||||||||||| || | | | | ||| | || | || ||| ||| Sbjct 453 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTAC--CCTC----CCGACTGCCTA 506 Query 4258 TGATGCTTACCCTATCGCTGGTTACTATGACGCTGGCTCTTATACTGTTGAAGACTGCGC 4317 ||||| ||| ||| | | |||| | |||| | ||| | |||||| || | ||||| | Sbjct 507 TGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGT 566 Query 4318 TACTATT--CCTACTCACGCTGTCTCTTCTGGCAACGATGTATATGTCGGCCTTATGCTT 4375 |||||| | | || | | | | | ||||| |||| ||||| || | ||| || Sbjct 567 GACTATTGACGTCCTTCCCCGTACGC--CGGGCAATAATGTTTATGTTGGTTTCATGGTT 624 Query 4376 TTCTCTCGCATGTGGCCCGTTGCAAAACTATCCGGTATCGCTTCCCTTAATCAGGTAAAC 4435 | ||| | | ||| | | ||| ||| | | ||| || |||||||| | Sbjct 625 TGGTCTAACTTTA---CCGCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGTTATT 681 Query 4436 AAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTCTCTATGTTTGGTGCAATCG 4494 || || | | |||||| || ||||| | |||| ||| |||||||||||| || | Sbjct 682 AAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT---TATGTTTGGTGCTATTG 738 Query 4495 CTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAACAAAGCCTTTGGGGGCGGTC 4554 |||||||||| || || |||||||||| || ||| ||| ||||| ||||||| Sbjct 739 CTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTC 798 Query 4555 AATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCTTC---TGACAATAACGTA- 4610 || ||| |||| |||| ||||||||||||| || ||| | | |||||| ||| Sbjct 799 AAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAG 858 Query 4611 --ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAAGGCTCTAATCCACCCAATG 4668 || || |||||||||||| ||||| || ||||||||||||||| || || Sbjct 859 GCATGGG------TGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACC 912 Query 4669 GCCAACAAGCTGCTCCCAATGCTATTTCGGGCGTTCTCGCTGACACTGGCAAA-GACGCC 4727 | | || | || | | | |||| || | | | ||| | |||| ||| ||| | Sbjct 913 CTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTC 972 Query 4728 CT--ATCTTCAAT-CA--CTGGC---GCTGGCGT---TAATAAACTTATGGAAAAAATCG 4776 | | | | | || ||||| ||| ||| | |||| | | || | | Sbjct 973 TTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTG 1032 Query 4777 GACTATCT---AAAACTGCTGCTGATAAAGGCAAGGACACAAAGGATTATCTTGCTTCTG 4833 |||| | || |||| ||||||||||| ||||| || |||||||||||| ||| Sbjct 1033 GACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTG 1092 Query 4834 CATTCCCCGACCTCAACCCGTGGGAACGTGCTGGCGCTGGTGCTTCGTCTGCTGGCATGG 4893 |||| || || || || | ||||| |||||||| |||| |||||| |||||||| |||| Sbjct 1093 CATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG 1152 Query 4894 TTGACGCTGGCTTCCAAAACCAAAAAGA 4921 ||||||| || || | || |||||||| Sbjct 1153 TTGACGCCGGATTTGAGAATCAAAAAGA 1180 Score = 167 bits (184), Expect = 8e-38 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072 || || || ||||| || || || ||||| ||||| |||||||| | ||| | || Sbjct 1272 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 1331 Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132 || || |||| | ||||||| |||||| | |||||||| | || |||| ||||| Sbjct 1332 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 1391 Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192 || ||| || |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 1392 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 1451 Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242 || |||||||||||||||||| | || || || ||| ||||||| |||| Sbjct 1452 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17382836007570