Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_007856.1
Length=5486
Score E
Sequences producing significant alignments: (Bits) Value
seq26622 897 0.0
>seq26622
Length=4617
Score = 897 bits (994), Expect = 0.0
Identities = 1026/1371 (75%), Gaps = 18/1371 (1%)
Strand=Plus/Plus
Query 468 TAATCGAAGAGTTAGACGAATGCTACAACGTGCTCGGACAACTTGATATTAATAACACTA 527
|||| || || || | |||||||||| |||||| ||||||||||||||||||||||
Sbjct 2053 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 2112
Query 528 TAGACCACAAACCTATCGGTAACGCCAAATGGGACTTAATGTATGAAAAACCTGTCTATA 587
|||||||| || || ||| |||||| ||| | | || || | ||
Sbjct 2113 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTT---- 2168
Query 588 AACACTGGTATG-----AACTGGTATCAAAACGACCCCTTAAATCAATCAGAGAGGACTA 642
|| | | | || | |||| | |||| || ||||| || | || || ||
Sbjct 2169 -ACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTA 2227
Query 643 CAACTATGCAAAGGCTAAGGGTACTAAAGATGAGTGCTCGAAAATCCTTGAGGAATCCAC 702
|| || | || || |||| ||| |||||||| || | | | || |||| |||||
Sbjct 2228 TAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCAC 2287
Query 703 CATGAAATCCCGCCGTGGCTTTACCGTTCAGAGATTGATGAATGCTATGCGTACTGCCCA 762
|||||||| || | |||||| | ||||| | ||||||||||| ||||| || ||
Sbjct 2288 TATGAAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCA 2347
Query 763 CACTGATGGCTGGTATGTTGTATTCGATACTCTCACCTTAGCTGATGATCGTATTA-AGG 821
||||||| |||| | | || || || |||||||| || ||||| || || |||| |||
Sbjct 2348 TGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCG-ATTAGAGG 2406
Query 822 ACTTCTATGCTAACCCCAATGCTCTTCGTGACTATTTCCGTGATATTGGCCGTATGGTTC 881
|| |||| ||| ||||||||| | ||||||||||| ||||||||||| ||||||||||
Sbjct 2407 CGTTTTATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTC 2466
Query 882 TCACTGCCGAGGGTCGTTCGGTCCATGATTCATCTTCGGACTGCTATCAGTACTTTTGTG 941
| ||||||||||||| || |||||||| | |||||||||||||| |||||||
Sbjct 2467 TTGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTG 2526
Query 942 TGCCTGAGTATGGCACCCAGC--ATGGCCGTTTACACTTTCACGCAGTGCATCTTATGCG 999
||||||||||||| | |||| |||||||| | || || || || ||||| |||||||
Sbjct 2527 TGCCTGAGTATGGTA--CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCG 2584
Query 1000 CACACTTCCTTTGGGTTCTCTCGACCCTAACTTTGGTAAGCTGGTGCGTACTAATCGGCA 1059
||||||||| ||| | |||||||| |||||| | ||| || | | || ||
Sbjct 2585 GACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCA 2644
Query 1060 AATAAATAGCTTGCAAAACACATGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTA 1119
|||||||||||||||| || ||||||||||||||| ||||||||||||||| || ||
Sbjct 2645 GTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTA 2704
Query 1120 TTCTCAGGATGCTTTCTCTCGCGCTGGATGGCTCTGGCCTGTCGATACAAAGGGTGAACC 1179
| ||||| ||||| || || |||| ||| | |||||||| ||| | || ||||| ||
Sbjct 2705 CACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCC 2764
Query 1180 CCTTAAATCCACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAATAAAAA 1239
|||||| | ||| ||||||||||| || ||||| || |||||||||||||| |||||
Sbjct 2765 GCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAA 2824
Query 1240 ATCTGATGTTGACATAGCCGCAAAAGGCTTAGGGAATCAAAAATGGAACGCTACATTAAA 1299
|| ||| | ||| | || || ||||| |||| | || |||||||| || ||||
Sbjct 2825 GTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAA 2884
Query 1300 AACGCAGATGGCTCTTTTACCAAAGAAACTATTTCGAATTCGAATGAGCCGCAACTTCGG 1359
||| || || | || | || ||||| || || |||| |||||||||||||||||||
Sbjct 2885 AACCAAGCTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGG 2944
Query 1360 GATGAAACTACTCCCAATGACGACGCTGACCGCGGAGTGTTTAATCCAACTGACCCAAGT 1419
||||||| | ||| ||||||| | ||| || ||||||| ||||||||||| ||| | |
Sbjct 2945 GATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCT 3004
Query 1420 GGGTTACGACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACG 1479
||||||||||| ||| ||||||||| | || |||||||||||||| || | |||| | |
Sbjct 3005 GGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAG 3064
Query 1480 ATTGAGGCTGGCAAAGCAATCTGTAGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAA 1539
||||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||
Sbjct 3065 ATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAA 3124
Query 1540 TCTGCTAAAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAGCCTACAGAGTTT 1599
|||||| ||||| |||||| || || || || || | |||| ||| ||||||||
Sbjct 3125 TCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTT 3184
Query 1600 TATCGCTTCAATGACGCAGAAATTAGCAAATACGGATATTTCTGATGAAACTAAAAACTA 1659
||||||||| ||||||||||| ||| || | |||||||||||||||| | ||||| ||
Sbjct 3185 TATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTA 3244
Query 1660 CGTTACTAATGCAGGAATTGCTGTTGCTGACTTACGACTTAAATCGAAGTGGACTGCTGG 1719
|| ||| ||||||||| || |||| |||||| ||||||||||||||||||||||
Sbjct 3245 TCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGG 3304
Query 1720 TGGAAAATGAAGAACTTCAATCTCAACTTAAAGAACTCGAGGGCGTCTTACTTCGCAACC 1779
||||||||| || ||| | || ||| | |||||| |||||||| || |||
Sbjct 3305 CGGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACC 3364
Query 1780 TTTCGCCATCATCTCAACG-TGGTAGCAAAGACTGACGCGCTTGATGAAGA 1829
||||||||||| || |||| | | |||| ||||||||| | ||||| ||
Sbjct 3365 TTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGA 3414
Score = 435 bits (482), Expect = 1e-118
Identities = 487/654 (74%), Gaps = 40/654 (6%)
Strand=Plus/Plus
Query 2223 TTGCTTATTATGTTCATCCCGTTAACATTCAAACGGCATGTCTTATTATGGAAGGCGCTG 2282
|||||||||||||||||||||| |||||||||||||| ||||| || |||||||||||||
Sbjct 3812 TTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTG 3871
Query 2283 AATTCACCGAAAACATCATTAATGGTGTCGATGCCCCGGTTAAAGCCGCTGAACTCTTCG 2342
|||| || |||||||| |||||||| ||||| |||||||||||||||||| | ||||
Sbjct 3872 AATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCG 3931
Query 2343 CGTTTACCTTGCGTGTACGCGCCGGAAACACTGAGCTTATTACTTACGCAGAAAACAATG 2402
|||||||||||||||||||||| ||||||||||| || ||||| |||||||| | || |
Sbjct 3932 CGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACG 3991
Query 2403 CGCGTGAAAAACTGCGCGCTCAAGGAGTGATG-GATGTC------TAAAAAATCTATTCG 2455
|||| ||||| | || || ||||||||||| ||||| ||||||| | | |
Sbjct 3992 TGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGG 4051
Query 2456 C---CGCTCTGGT---------------------------GGCAAATCTAAAGGTGCTCG 2485
| ||| ||||| ||||| |||||| |||||
Sbjct 4052 CGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCG 4111
Query 2486 CCTCTGGTATGTTGGCGGCACACAATTCTAATCTCTAAGGGGCTTCGGCCCCTCTATTTA 2545
|| |||||||| || || |||||| |||| | |||||||||||||||| || ||
Sbjct 4112 TCTTTGGTATGTAGGTGGTCAACAATTTTAATTGC--AGGGGCTTCGGCCCCT-TACTTG 4168
Query 2546 AGGATACAAAATGTCTAACGTACAAACTTCCGCTGAACGTATTCCGCATGACCTCTCACA 2605
|||||| | |||||||| | |||||| ||| || ||||| ||||||||||| || ||
Sbjct 4169 AGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCA 4228
Query 2606 TCTGGTATTCGAAGCTGGTAAAATCGGACGCCTTAAAACTATCTCCTGGACTCCTGTTGT 2665
||| | ||| |||||| | || || || |||| || || || ||||| ||| |
Sbjct 4229 TCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTAT 4288
Query 2666 CGCTGGTGATTCTTACGAAACTGAAATGGTAGGCGCTATTCGTCTTTCTCCTCTCCGTCG 2725
|||||| || || | ||| | || || |||||| | ||||||||||| | |||||
Sbjct 4289 CGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCG 4348
Query 2726 TGGTCTGGCTGTCGACTCTCGCGTCGACGTCTTTACTTTCTATATCCCTCATCGTCATGT 2785
||| || ||| | |||||| || ||| | |||||||| ||| ||||||||||||| ||
Sbjct 4349 TGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGT 4408
Query 2786 CTATGGTCAACAATGGATTGACTTTATGAAGACTGGCGTTAACGCTACTCCTCT 2839
|||||| |||| |||||| | || |||||| ||| ||||| || ||||||||
Sbjct 4409 TTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCACTCCTCT 4462
Score = 179 bits (198), Expect = 1e-41
Identities = 658/1047 (63%), Gaps = 71/1047 (7%)
Strand=Plus/Plus
Query 4445 CTCCAACCTCTTAAATAAGGTCTAATCTATGTTCGGTGCAATCGCTGGCGGTATCGCCTC 4504
||||| || ||||| | |||| || |||||| ||||| || ||||||||||| || ||
Sbjct 697 CTCCAGCCACTTAAGTGAGGTG--ATTTATGTTTGGTGCTATTGCTGGCGGTATTGCTTC 754
Query 4505 CTCTCTCGCTGGTGGACTCCTGAACAAAGCATTCGGGGGCGGTTCTTCCGCTCCCCAATC 4564
|||| |||||||| | || ||| || || |||||| || ||
Sbjct 755 TGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGG 814
Query 4565 TGGCGTTCAAGGTAATGTCCTCGCTACTGA---CAATAATGTA---ATCGGTGCTAATGA 4618
|||| |||||||| |||| || ||||| || ||||| |||| || |||| |
Sbjct 815 TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTG------A 868
Query 4619 TGCTGGTATCAAATCCGCTATTCAGGGTTCTAATCCTCCCAATGGTCAACAAGCTGCTCC 4678
||||||||| ||||| || ||||| || |||||| ||| || | | | || | ||
Sbjct 869 TGCTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCC 928
Query 4679 CAATGCTATATCGGGCGTTCTTGCCGATACTGGCAAAG-ACGCCCT--ATCTTCAAT-CA 4734
| | | | || || | | | || | |||| |||| || | | | | | | ||
Sbjct 929 TAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCA 988
Query 4735 --CTGGCGCT---GGCGTTA---ATAAACTTATGGAAAAAATCGGACTCTCTA--AAGA- 4783
||||| || | |||| |||| | | || | ||||| | |||
Sbjct 989 GGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTC 1048
Query 4784 TGCTGCTGCTAAAGGTAAGGATACGAAAGATTATCTTGCTTCTGCGTTCCCCGAACTCAA 4843
||| |||| |||||| |||||||| |||||||||||| |||| || || || || ||
Sbjct 1049 TGCCGCTGATAAAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAA 1108
Query 4844 CCCGTGGGAACGTGCTGGCGCTGGTGCTTCTTCTGCTGGAATGGTTGATGCGGGATTCCA 4903
| ||||| |||||||| |||| |||||| |||||||| |||||||| || ||||| |
Sbjct 1109 TGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGA 1168
Query 4904 AAACCAAAAGGAATTAACTCGCATGCAGCTTGACNNNNNNNNNNNNNNNNNNNNNNNNNN 4963
|| ||||| || | ||| ||||| || |||
Sbjct 1169 GAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGATGCA 1228
Query 4964 NNNNNNNNNNNNNNNNNNNNNNNNNNNTATCCAGTCTGTTACTTCTCGGCAAAATACTAA 5023
|| ||||| | ||||| || || ||||| ||
Sbjct 1229 AAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAA 1288
Query 5024 GGACTCTGTGTATGCTCAAAACGAAATGCTCCAATACAACCAAAAAGAATCTATGTCACG 5083
||| || ||||| ||||| || ||||| || | || || || |||| | ||
Sbjct 1289 AGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCG 1348
Query 5084 CGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAACAACAAACTTCTGAAATTAT 5143
||||| ||||| | |||||||| | || |||| ||||| || ||| || |||||
Sbjct 1349 CGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTAT 1408
Query 5144 GCGGCAAATGCTTACTCAGGCTCAAACCTCAGGTCAACACTTTACAAATGACCAAATCCA 5203
||| |||||||||||||| |||||||| | ||||| | ||||| |||||||||||| |
Sbjct 1409 GCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTTACCAATGACCAAATCAA 1468
Query 5204 AGAACTTACTCGAAAGGTCGGCGCTGATATTGATGCTGTTCGTGCTAACACTGAACGTAC 5263
|||| | ||||| ||||| | ||||| |||| |||| | || |
Sbjct 1469 AGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTC-----ATCA--------GC 1515
Query 5264 ACATGTAGAAACGGACCGCTCTAAGCAGGAGGTCCAAAACTCTCGTTACGCTTCCTCACA 5323
| | | |||| | | || || | || || ||
Sbjct 1516 AAACGCAGAATCAG-----------------------------CGGTATGGCTCTTCTCA 1546
Query 5324 AGTCGGTAAAACCGCCAAGGATGTATCAAATGTCATTAGTGACGCATCTTCTGGTATTGT 5383
| || || || |||||| | || |||||| | | ||| || |||||||| | ||
Sbjct 1547 TATTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGT 1606
Query 5384 TGATTATTTTCGTGGCGTTGATAAAGCTGTCGCGGATACTTGGAACAATTATTTCAAAGA 5443
|||| ||||| ||| ||||||||||||| || |||||||||||||||| | |||||
Sbjct 1607 TGATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTTCTGGAAAGA 1666
Query 5444 TGGCAAATCGGATGGGATAAGCTCAAA 5470
|| ||| | ||||| || |||| ||
Sbjct 1667 CGGTAAAGCTGATGGTATTGGCTCTAA 1693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 17382836007570
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