Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_014929.1
Length=1703
Score E
Sequences producing significant alignments: (Bits) Value
seq251874 102 9e-19
seq192907 96.9 4e-17
seq16718 95.1 1e-16
seq55868 93.3 4e-16
seq32853 78.8 1e-11
>seq251874
Length=1306
Score = 102 bits (112), Expect = 9e-19
Identities = 167/240 (70%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 472 AAAACATGGGTCTACTACTACTGGGGACCACCAGGCACGGGAAAATCACGACGAGCTCTG 531
||||| ||| || ||||| | || | ||| || ||||| || |||||||| ||
Sbjct 410 AAAACTGAGGTATATTACTATTACGGCCAACCGGGTGTAGGAAAGTCTCGACGAGCCCTC 469
Query 532 GAAGAAGCATCCCAAATCAACAGCAATAGTATATACTACAAACCACGTGGACTCTGGTGG 591
|||||||| || || | | ||| | || |||| ||| |||| ||||||
Sbjct 470 GAAGAAGCTTCTGCTGTCG---GTGAACCTATCTTTTATAAACAACGAGGACCTTGGTGG 526
Query 592 GACGGTTATCATCAACAAGAAAATGTCATCATAGACGATTTCTACGGATGGATAAAGTAC 651
||||| ||| | ||| || |||||||| ||||| |||||||||||||| |||
Sbjct 527 GACGGATATGACTTCCAACCCAACGTCATCATTGACGACTTCTACGGATGGATCGCCTAC 586
Query 652 GACGAACTCCTCAAAATAACTGACCGCTACCCATATAAAGTACAAATCAAAGGAGGATTT 711
||||| || || |||||| ||| | || ||||| | ||| | |||||||| ||||||
Sbjct 587 GACGAGCTTCTTAAAATATGTGATAGATATCCATACAGAGTGCCCATCAAAGGCGGATTT 646
>seq192907
Length=1861
Score = 96.9 bits (106), Expect = 4e-17
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 561 TATATACTACAAACCACGTGGACTCTGGTGGGACGGTTATCATCAACAAGAAAATGTCAT 620
||| | ||| |||| ||| | | ||||||||||| || | | ||| |||||||||
Sbjct 1001 TATCTTCTATAAACAACGAGAAAAATGGTGGGACGGATACGAATACCAACCAAATGTCAT 1060
Query 621 CATAGACGATTTCTACGGATGGATAAAGTACGACGAACTCCTCAAAATAACTGACCGCTA 680
||| |||||||||||||||||||| || ||||| || ||||||||| || | ||
Sbjct 1061 CATCGACGATTTCTACGGATGGATCGCATATGACGAGCTTCTCAAAATATGCGATAGATA 1120
Query 681 CCCATATAAAGTACAAATCAAAGGAGGATTT 711
|| || |||| |||||||||||||||
Sbjct 1121 TCCTTACCGCGTACCCATCAAAGGAGGATTT 1151
>seq16718
Length=10213
Score = 95.1 bits (104), Expect = 1e-16
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 567 CTACAAACCACGTGGACTCTGGTGGGACGGTTATCATCAACAAGAAAATGTCATCATAGA 626
|||||||| | | | | ||||||||||| || | | ||| ||| ||||| || ||
Sbjct 9233 CTACAAACAAAGAGAAAAGTGGTGGGACGGATACGAATATCAACCAAACGTCATTATTGA 9174
Query 627 CGATTTCTACGGATGGATAAAGTACGACGAACTCCTCAAAATAACTGACCGCTACCCATA 686
||| |||||||||||||| |||||||| || || ||| || ||| || || |||||
Sbjct 9173 CGACTTCTACGGATGGATCGCATACGACGAGCTTCTTAAAGTATGTGATCGATATCCATA 9114
Query 687 TAAAGTACAAATCAAAGGAGGATTT 711
| ||| | |||||||||||||||
Sbjct 9113 CAGAGTTCCCATCAAAGGAGGATTT 9089
>seq55868
Length=5588
Score = 93.3 bits (102), Expect = 4e-16
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 586 TGGTGGGACGGTTATCATCAACAAGAAAATGTCATCATAGACGATTTCTACGGATGGATA 645
||||||||||| ||| | | ||||| || ||||||| || || || ||||||||||||
Sbjct 1754 TGGTGGGACGGATATGAATACCAAGACAACATCATCATCGATGACTTTTACGGATGGATA 1695
Query 646 AAGTACGACGAACTCCTCAAAATAACTGACCGCTACCCATATAAAGTACAAATCAAAGGA 705
| |||||||| || |||||| ||| || ||||| ||| ||| | |||||||||
Sbjct 1694 CCACATGACGAACTTCTTAAAATATGTGATCGATACCCCTATCGAGTGCCTATCAAAGGA 1635
Query 706 GGATTT 711
|| |||
Sbjct 1634 GGCTTT 1629
>seq32853
Length=7534
Score = 78.8 bits (86), Expect = 1e-11
Identities = 93/126 (74%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 586 TGGTGGGACGGTTATCATCAACAAGAAAATGTCATCATAGACGATTTCTACGGATGGATA 645
|||||||| || || | | || || ||||| ||||| || || || ||||||||||||
Sbjct 6500 TGGTGGGATGGCTACGAATATCAGGACAATGTTATCATCGATGACTTTTACGGATGGATA 6441
Query 646 AAGTACGACGAACTCCTCAAAATAACTGACCGCTACCCATATAAAGTACAAATCAAAGGA 705
|| | |||||| || |||||| ||| || ||||| ||| ||| | || ||||||
Sbjct 6440 CCATATGGCGAACTTCTTAAAATATGTGATCGATACCCCTATCGAGTGCCTATTAAAGGA 6381
Query 706 GGATTT 711
|| |||
Sbjct 6380 GGCTTT 6375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5313425956584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |