Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_015399.1 Length=1957 Score E Sequences producing significant alignments: (Bits) Value seq32853 89.7 6e-15 >seq32853 Length=7534 Score = 89.7 bits (98), Expect = 6e-15 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 665 CTATAAGCCTCGCGGTATGTGGTGGGATGGATACGATGGACAAGAGAATGTAATTGTCGA 724 |||||||| || | | |||||||||||| ||||| || || ||||| || |||| Sbjct 6519 CTATAAGCAACGAGACAAGTGGTGGGATGGCTACGAATATCAGGACAATGTTATCATCGA 6460 Query 725 TGACTTTTACGGCTGGATGCCATGTGATGAACTGTTGAGAGTGTTTGATCGATATCCTTG 784 |||||||||||| ||||| |||| || ||||| | | | | | ||||||||| || | Sbjct 6459 TGACTTTTACGGATGGATACCATATGGCGAACTTCTTAAAATATGTGATCGATACCCCTA 6400 Query 785 TAAAGTACCGGTAAAAGGAGCCTATGTGGAATTTGTGTC 823 | ||| || | ||||||| || | | |||||||| Sbjct 6399 TCGAGTGCCTATTAAAGGAGGCTTTCGAAAGTTTGTGTC 6361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6122059984728