Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_023868.1 Length=1711 Score E Sequences producing significant alignments: (Bits) Value seq251874 80.6 3e-12 >seq251874 Length=1306 Score = 80.6 bits (88), Expect = 3e-12 Identities = 83/109 (76%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 812 ATAGATATCTATCTGTAATTTTGAGCACTTCGTCATAGGCGAGCCATCCGTAGTAGTCAT 871 || |||||||||| ||||| || | ||||| ||||||| |||||||||| |||| | Sbjct 620 ATGGATATCTATCACATATTTTAAGAAGCTCGTCGTAGGCGATCCATCCGTAGAAGTCGT 561 Query 872 CGACGATGACGGTCGTTTCACCGTTATACCCGTCCCACCAAGGACCCCG 920 | | ||||||| | | || || ||| |||||||||||||| || || Sbjct 560 CAATGATGACGTTGGGTTGGAAGTCATATCCGTCCCACCAAGGTCCTCG 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5338894744872