Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_025791.1
Length=1755
Score E
Sequences producing significant alignments: (Bits) Value
seq32853 78.8 1e-11
>seq32853
Length=7534
Score = 78.8 bits (86), Expect = 1e-11
Identities = 169/246 (69%), Gaps = 10/246 (4%)
Strand=Plus/Plus
Query 899 AATCCTCCTTTAATCTGTACCTTGTATGGGTAGCGGTCCATTATTTTCAGCATTTCGTCA 958
|| ||||||||||| | || || ||||| || || |||||| || | |||| ||
Sbjct 6376 AAGCCTCCTTTAATAGGCACTCGATAGGGGTATCGATCACATATTTTAAGAAGTTCGCCA 6435
Query 959 TACTTTATCCAGCCGTAGAAGTCGTCGATGATTACGCAATCATGTTGTTGATATCCGTCC 1018
|| |||||| ||||| ||||| |||||||| || || || | || || || |||
Sbjct 6436 TATGGTATCCATCCGTAAAAGTCATCGATGATAACATTGTCCTGATATTCGTAGCCATCC 6495
Query 1019 CACCA-TAGTCCACGAGGTTTATAGTATATGGAAGTCCCTCTTTGTT--TAGCCTCCTCA 1075
||||| | || | || | |||||| | ||||| ||| | || |||| || ||
Sbjct 6496 CACCACTTGT-CTCGTTGCTTATAGAAAATGGA--TCCACCGACATTAGTAGCTTCTTCC 6552
Query 1076 AGTGCACGCTTTGATTTTCCGGAGCCAGGTGGTCCCCA--ATAGTAGTATACTTCTGTTT 1133
|| || | |||| ||||| || |||| ||||| ||| | | |||| |||||||
Sbjct 6553 AGGGCTCTTCTTGACTTTCCTACACCTGGTG--CCCCATGATAATGGAATACCTCTGTTT 6610
Query 1134 TGAAAT 1139
||||||
Sbjct 6611 TGAAAT 6616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5478973080456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |