Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_025791.1 Length=1755 Score E Sequences producing significant alignments: (Bits) Value seq32853 78.8 1e-11 >seq32853 Length=7534 Score = 78.8 bits (86), Expect = 1e-11 Identities = 169/246 (69%), Gaps = 10/246 (4%) Strand=Plus/Plus Query 899 AATCCTCCTTTAATCTGTACCTTGTATGGGTAGCGGTCCATTATTTTCAGCATTTCGTCA 958 || ||||||||||| | || || ||||| || || |||||| || | |||| || Sbjct 6376 AAGCCTCCTTTAATAGGCACTCGATAGGGGTATCGATCACATATTTTAAGAAGTTCGCCA 6435 Query 959 TACTTTATCCAGCCGTAGAAGTCGTCGATGATTACGCAATCATGTTGTTGATATCCGTCC 1018 || |||||| ||||| ||||| |||||||| || || || | || || || ||| Sbjct 6436 TATGGTATCCATCCGTAAAAGTCATCGATGATAACATTGTCCTGATATTCGTAGCCATCC 6495 Query 1019 CACCA-TAGTCCACGAGGTTTATAGTATATGGAAGTCCCTCTTTGTT--TAGCCTCCTCA 1075 ||||| | || | || | |||||| | ||||| ||| | || |||| || || Sbjct 6496 CACCACTTGT-CTCGTTGCTTATAGAAAATGGA--TCCACCGACATTAGTAGCTTCTTCC 6552 Query 1076 AGTGCACGCTTTGATTTTCCGGAGCCAGGTGGTCCCCA--ATAGTAGTATACTTCTGTTT 1133 || || | |||| ||||| || |||| ||||| ||| | | |||| ||||||| Sbjct 6553 AGGGCTCTTCTTGACTTTCCTACACCTGGTG--CCCCATGATAATGGAATACCTCTGTTT 6610 Query 1134 TGAAAT 1139 |||||| Sbjct 6611 TGAAAT 6616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5478973080456