Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014-
09-26] 482,396 sequences; 1,258,717,181 total letters
Query= NC_031755.1
Length=2229
Score E
Sequences producing significant alignments: (Bits) Value
seq192907 82.4 1e-12
seq16718 78.8 1e-11
>seq192907
Length=1861
Score = 82.4 bits (90), Expect = 1e-12
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 583 AACTGGTGGCACGGATACCGACAAGAATCAACAGTCATCATCGACGACTTCTATGGATGG 642
|| |||||| |||||||| | | || ||| |||||||||||||| ||||| ||||||
Sbjct 1023 AAATGGTGGGACGGATACGAATACCAACCAAATGTCATCATCGACGATTTCTACGGATGG 1082
Query 643 ATTAAATGGGATGAACTCCTCAAAATCTGCGATCGTTACCCCTACAAGGTGGAAACCAAA 702
|| || || || || |||||||| |||||| | || || ||| || | ||||
Sbjct 1083 ATCGCATATGACGAGCTTCTCAAAATATGCGATAGATATCCTTACCGCGTACCCATCAAA 1142
Query 703 GGAGGATATGAAGAATTT 720
||||||| | | |||||
Sbjct 1143 GGAGGATTTAGAAAATTT 1160
>seq16718
Length=10213
Score = 78.8 bits (86), Expect = 1e-11
Identities = 103/143 (72%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 567 CTACAAAAATAGAAGTAACTGGTGGCACGGATACCGACAAGAATCAACAGTCATCATCGA 626
||||||| | ||| || |||||| |||||||| | | || ||| ||||| || ||
Sbjct 9233 CTACAAACAAAGAGAAAAGTGGTGGGACGGATACGAATATCAACCAAACGTCATTATTGA 9174
Query 627 CGACTTCTATGGATGGATTAAATGGGATGAACTCCTCAAAATCTGCGATCGTTACCCCTA 686
||||||||| |||||||| || || || || || ||| | || ||||| || || ||
Sbjct 9173 CGACTTCTACGGATGGATCGCATACGACGAGCTTCTTAAAGTATGTGATCGATATCCATA 9114
Query 687 CAAGGTGGAAACCAAAGGAGGAT 709
|| || | |||||||||||
Sbjct 9113 CAGAGTTCCCATCAAAGGAGGAT 9091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6987998786520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |