Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirometra_20erinaceieuropaei_20[genbank_20GCA_5F000951995.1_202014- 09-26] 482,396 sequences; 1,258,717,181 total letters Query= NC_031755.1 Length=2229 Score E Sequences producing significant alignments: (Bits) Value seq192907 82.4 1e-12 seq16718 78.8 1e-11 >seq192907 Length=1861 Score = 82.4 bits (90), Expect = 1e-12 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 583 AACTGGTGGCACGGATACCGACAAGAATCAACAGTCATCATCGACGACTTCTATGGATGG 642 || |||||| |||||||| | | || ||| |||||||||||||| ||||| |||||| Sbjct 1023 AAATGGTGGGACGGATACGAATACCAACCAAATGTCATCATCGACGATTTCTACGGATGG 1082 Query 643 ATTAAATGGGATGAACTCCTCAAAATCTGCGATCGTTACCCCTACAAGGTGGAAACCAAA 702 || || || || || |||||||| |||||| | || || ||| || | |||| Sbjct 1083 ATCGCATATGACGAGCTTCTCAAAATATGCGATAGATATCCTTACCGCGTACCCATCAAA 1142 Query 703 GGAGGATATGAAGAATTT 720 ||||||| | | ||||| Sbjct 1143 GGAGGATTTAGAAAATTT 1160 >seq16718 Length=10213 Score = 78.8 bits (86), Expect = 1e-11 Identities = 103/143 (72%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 567 CTACAAAAATAGAAGTAACTGGTGGCACGGATACCGACAAGAATCAACAGTCATCATCGA 626 ||||||| | ||| || |||||| |||||||| | | || ||| ||||| || || Sbjct 9233 CTACAAACAAAGAGAAAAGTGGTGGGACGGATACGAATATCAACCAAACGTCATTATTGA 9174 Query 627 CGACTTCTATGGATGGATTAAATGGGATGAACTCCTCAAAATCTGCGATCGTTACCCCTA 686 ||||||||| |||||||| || || || || || ||| | || ||||| || || || Sbjct 9173 CGACTTCTACGGATGGATCGCATACGACGAGCTTCTTAAAGTATGTGATCGATATCCATA 9114 Query 687 CAAGGTGGAAACCAAAGGAGGAT 709 || || | ||||||||||| Sbjct 9113 CAGAGTTCCCATCAAAGGAGGAT 9091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6987998786520