Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20asiatica_20[genbank_20GCA_5F001693035.2_202016-09-02] 6,900 sequences; 168,679,183 total letters Query= NC_024700.1 Length=1773 Score E Sequences producing significant alignments: (Bits) Value seq107 87.8 2e-14 >seq107 Length=303924 Score = 87.8 bits (96), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 519 AGAAGC-CAAAGCTACAAATGAATCAATTTACTACAAACCCAGAGGAGATTGGTGGGATG 577 |||||| ||||| | |||||| || | || ||||| |||||||| |||| ||| | Sbjct 256734 AGAAGCACAAAGA-ATTAATGAAGAAACATGTTAGAAACCAAGAGGAGAATGGTAGGACG 256792 Query 578 GATACGAACAACAACCAAATGTTATCATCGACGATTTCTACGGATGGATCAAATACGACG 637 |||| | |||||||| ||||| || || |||| || || ||||||||||||| ||| | Sbjct 256793 GATATGCGCAACAACCCAATGTAATAATTGACGGCTTTTAGGGATGGATCAAATGCGATG 256852 Query 638 AACTATTAAAAATAATGGATAGATACCCATACAGA 672 || | | || | | | ||||| ||||||||| Sbjct 256853 AATTGTCGAAGACATGCGGCAGATATCCATACAGA 256887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5564392030600