Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_014928.1 Length=1751 Score E Sequences producing significant alignments: (Bits) Value seq10842 109 6e-21 >seq10842 Length=63521 Score = 109 bits (120), Expect = 6e-21 Identities = 163/227 (72%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 463 CGCGATTTCAAGACTGAGGTTTTTTATTACTGGGGGCCGCCAGGATCTGGGAAA-TCTAG 521 || || || || || ||| | | ||| ||| || |||||||| | ||||||| || | Sbjct 55457 CGAGACTTTAAAACAGAGATATATTACTACCATGGTCCGCCAGG-TGTGGGAAAGTCACG 55515 Query 522 AAGAGCGCTTGAGGAAGCGA-GGCAACTTGACGGAGAATCCATATACTACAAACCCCGAG 580 |||| |||||| || | ||||||| ||||||||||| |||||||| || ||| Sbjct 55516 CCGAGCTTATGAGGAGGCAAAGGCAACT----GGAGAATCCATCTACTACAAGCCGAGAG 55571 Query 581 GATTATGGTGGGATGGCTATGAACAACAGCGCAGCGTTATAATAGACGACTTCTATGGAT 640 || |||||||| |||||| || || | || ||| || || || || |||||| | Sbjct 55572 GAGACTGGTGGGACGGCTATATTCAGCAACCCAACGTCATTATCGATGATCACTATGGGT 55631 Query 641 GGATAAAGTACGACGAAATGCTGAAAATAATGGACCGCTACCCATAC 687 || | ||||| |||||| | || || || ||| |||| ||||| ||| Sbjct 55632 GGCTTAAGTATGACGAACTTCTCAAGATCATGAACCGATACCCCTAC 55678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5493633438482