Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_014929.1
Length=1703
Score E
Sequences producing significant alignments: (Bits) Value
seq10842 93.3 5e-16
>seq10842
Length=63521
Score = 93.3 bits (102), Expect = 5e-16
Identities = 186/274 (68%), Gaps = 5/274 (2%)
Strand=Plus/Plus
Query 472 AAAACATGGGTCTACTACTACTGGGGACCACCAGGCACGGGAAAATCACGACGAGCTCTG 531
|||||| | | || |||||| || || ||||| |||||| ||||| ||||||
Sbjct 55466 AAAACAGAGATATATTACTACCATGGTCCGCCAGGTGTGGGAAAGTCACGCCGAGCTTAT 55525
Query 532 GAAGAAGCATCCCAAATCAACAGCAATAGT-ATATACTACAAACCACGTGGACTCTGGTG 590
|| || ||| || |||| | | | || |||||||| || | ||| ||||||
Sbjct 55526 GAGGAGGCA----AAGGCAACTGGAGAATCCATCTACTACAAGCCGAGAGGAGACTGGTG 55581
Query 591 GGACGGTTATCATCAACAAGAAAATGTCATCATAGACGATTTCTACGGATGGATAAAGTA 650
|||||| ||| ||| ||| || ||||| || || ||| ||| || ||| | |||||
Sbjct 55582 GGACGGCTATATTCAGCAACCCAACGTCATTATCGATGATCACTATGGGTGGCTTAAGTA 55641
Query 651 CGACGAACTCCTCAAAATAACTGACCGCTACCCATATAAAGTACAAATCAAAGGAGGATT 710
|||||||| ||||| || | |||| ||||| || ||| | || ||||| |
Sbjct 55642 TGACGAACTTCTCAAGATCATGAACCGATACCCCTACCGAGTTCCTATTAAAGGCTCTTA 55701
Query 711 TGAGGAGTTCACATCAAAACGCATTTGGTTTACA 744
|||| ||||| || ||| | || ||| | |||
Sbjct 55702 CGAGGTGTTCAACTCCAAAAGAATCTGGATAACA 55735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5340054868274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |