Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_021707.2 Length=1855 Score E Sequences producing significant alignments: (Bits) Value seq10842 84.2 3e-13 >seq10842 Length=63521 Score = 84.2 bits (92), Expect = 3e-13 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 778 CACCTACTACAAGCCGCGTGGAGAATGGTGGGATGGATACACCGGACAACCGTGCGTTGT 837 || ||||||||||||| | ||||| |||||||| || || | ||||| ||| | Sbjct 55552 CATCTACTACAAGCCGAGAGGAGACTGGTGGGACGGCTATATTCAGCAACCCAACGTCAT 55611 Query 838 TATCGATGACTTCTACGGATGGATCAAATACGATGAGCTTCTCAAGATCTGCGACAGATA 897 ||||||||| ||| || ||| | || || || || |||||||||||| || |||| Sbjct 55612 TATCGATGATCACTATGGGTGGCTTAAGTATGACGAACTTCTCAAGATCATGAACCGATA 55671 Query 898 TCCTTACAGAGTCCCTGTCAAAGG 921 || ||| |||| ||| | ||||| Sbjct 55672 CCCCTACCGAGTTCCTATTAAAGG 55695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5826387007266