Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_023866.1
Length=1784
Score E
Sequences producing significant alignments: (Bits) Value
seq10842 102 9e-19
>seq10842
Length=63521
Score = 102 bits (112), Expect = 9e-19
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 1081 GTAGGGGTATCGGTCCATTATTTTCAGCATTTCGTCATATTTTATCCATCCATAGAAGTC 1140
|||||||||||||| ||| || || || | ||||||||| || | ||| |||||| ||
Sbjct 55678 GTAGGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTAAGCCACCCATAGTGATC 55619
Query 1141 GTCTATGATGACGTTGTCCTGTTGATGGTAGCCGTCCCACCAGAGCCCTCTAGGTTTGTA 1200
|| || ||||||||| || ||| ||||||||||||||| ||||| || |||||
Sbjct 55618 ATCGATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAGTCTCCTCTCGGCTTGTA 55559
Query 1201 GTAAATTTCGCCTTCTATTTCCATAGCCTCTTTGAGAGCGCGGCTAGATTTGCCCGATCC 1260
||| || || | || || | ||||| | ||| |||| || || ||| ||
Sbjct 55558 GTAGATGGATTCTCCAGTTGCCTTTGCCTCCTCATAAGCTCGGCGTGACTTTCCCACACC 55499
Query 1261 GGTTGGTCCCCAGTAGTAGTATACCCATGTTTTAAA 1296
| || || |||||| |||| | |||||||||
Sbjct 55498 TGGCGGACCATGGTAGTAATATATCTCTGTTTTAAA 55463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5599218705500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |