Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_023866.1 Length=1784 Score E Sequences producing significant alignments: (Bits) Value seq10842 102 9e-19 >seq10842 Length=63521 Score = 102 bits (112), Expect = 9e-19 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 1081 GTAGGGGTATCGGTCCATTATTTTCAGCATTTCGTCATATTTTATCCATCCATAGAAGTC 1140 |||||||||||||| ||| || || || | ||||||||| || | ||| |||||| || Sbjct 55678 GTAGGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTAAGCCACCCATAGTGATC 55619 Query 1141 GTCTATGATGACGTTGTCCTGTTGATGGTAGCCGTCCCACCAGAGCCCTCTAGGTTTGTA 1200 || || ||||||||| || ||| ||||||||||||||| ||||| || ||||| Sbjct 55618 ATCGATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAGTCTCCTCTCGGCTTGTA 55559 Query 1201 GTAAATTTCGCCTTCTATTTCCATAGCCTCTTTGAGAGCGCGGCTAGATTTGCCCGATCC 1260 ||| || || | || || | ||||| | ||| |||| || || ||| || Sbjct 55558 GTAGATGGATTCTCCAGTTGCCTTTGCCTCCTCATAAGCTCGGCGTGACTTTCCCACACC 55499 Query 1261 GGTTGGTCCCCAGTAGTAGTATACCCATGTTTTAAA 1296 | || || |||||| |||| | ||||||||| Sbjct 55498 TGGCGGACCATGGTAGTAATATATCTCTGTTTTAAA 55463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5599218705500