Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_023869.1
Length=1896
Score E
Sequences producing significant alignments: (Bits) Value
seq10267 113 5e-22
seq10842 80.6 3e-12
>seq10267
Length=201018
Score = 113 bits (124), Expect = 5e-22
Identities = 97/120 (81%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 1051 GTAGGGGTATCTGTCACAAATTTTGAGTAGGTCGTCGTATTTGATCCATCCGTAGAAGTC 1110
||| || |||||| || || || || | |||||| |||||||||||||||| |||||
Sbjct 41477 GTATGGACATCTGTTGCATATCTTCAGCAATTCGTCGCATTTGATCCATCCGTAAAAGTC 41536
Query 1111 GTCTATAATTACACTTGTTTGTTGGTGGTATCCGTCCCACCATTCTCCTCTTGGTTTGTA 1170
||| || |||||| | | |||||| ||||||||| ||||||||||||||||||||||
Sbjct 41537 GTCAATTATTACATTGGGTTGTTGCACATATCCGTCCTACCATTCTCCTCTTGGTTTGTA 41596
>seq10842
Length=63521
Score = 80.6 bits (88), Expect = 3e-12
Identities = 104/144 (72%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 1034 CCTTTGATCGGTACTTTGTAGGGGTATCTGTCACAAATTTTGAGTAGGTCGTCGTATTTG 1093
||||| || || ||| ||||||||||| || || ||||| || ||||| || ||
Sbjct 55695 CCTTTAATAGGAACTCGGTAGGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTA 55636
Query 1094 ATCCATCCGTAGAAGTCGTCTATAATTACACTTGTTTGTTGGTGGTATCCGTCCCACCAT 1153
| ||| || ||| || || ||||| || | | ||| || || |||||||||||
Sbjct 55635 AGCCACCCATAGTGATCATCGATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAG 55576
Query 1154 TCTCCTCTTGGTTTGTAGTATATG 1177
|||||||| || |||||||| |||
Sbjct 55575 TCTCCTCTCGGCTTGTAGTAGATG 55552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5957568702652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |