Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_025476.1
Length=1865
Score E
Sequences producing significant alignments: (Bits) Value
seq10842 93.3 5e-16
seq10267 86.0 7e-14
>seq10842
Length=63521
Score = 93.3 bits (102), Expect = 5e-16
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 936 CCTTTGACAGGGACTCTGTAAGGATATCTGTCGCAGATCTTGAGAAGCTCGTCGTATTTG 995
||||| | ||| |||| ||| || |||| || |||||||||||| ||||| || ||
Sbjct 55695 CCTTTAATAGGAACTCGGTAGGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTA 55636
Query 996 ATCCATCCGTAGAAGTCATCGATAACAACGCAGGGTTGTCCGGTGTATCCATCCCACCAT 1055
| ||| || ||| |||||||||| ||| |||||| | || || ||||||||
Sbjct 55635 AGCCACCCATAGTGATCATCGATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAG 55576
Query 1056 TCTCCGCGCGGCTTGTAGTAG 1076
||||| | |||||||||||||
Sbjct 55575 TCTCCTCTCGGCTTGTAGTAG 55555
>seq10267
Length=201018
Score = 86.0 bits (94), Expect = 7e-14
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 950 TCTGTAAGGATATCTGTCGCAGATCTTGAGAAGCTCGTCGTATTTGATCCATCCGTAGAA 1009
|| ||| ||| |||||| ||| ||||| || | |||||| |||||||||||||||| ||
Sbjct 41474 TCCGTATGGACATCTGTTGCATATCTTCAGCAATTCGTCGCATTTGATCCATCCGTAAAA 41533
Query 1010 GTCATCGATAACAACGCAGGGTTGTCCGGTGTATCCATCCCACCATTCTCCGCGCGGCTT 1069
||| || || | || ||||||| ||||| ||| |||||||||| | || ||
Sbjct 41534 GTCGTCAATTATTACATTGGGTTGTTGCACATATCCGTCCTACCATTCTCCTCTTGGTTT 41593
Query 1070 GTAGTAGGTTTC 1081
||| | |||||
Sbjct 41594 GTAACATGTTTC 41605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5858382542726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |