Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_025791.1 Length=1755 Score E Sequences producing significant alignments: (Bits) Value seq10842 87.8 2e-14 >seq10842 Length=63521 Score = 87.8 bits (96), Expect = 2e-14 Identities = 191/285 (67%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 865 TGTTATCCATATGTATTTGCTGGTGAATTCCTCGAATCCTCCTTTAATCTGTACCTTGTA 924 ||||||||| || |||| | |||| ||||| | |||||||| | || ||| Sbjct 55735 TGTTATCCAGATTCTTTTGGAGTTGAACACCTCGTAAGAGCCTTTAATAGGAACTCGGTA 55676 Query 925 TGGGTAGCGGTCCATTATTTTCAGCATTTCGTCATACTTTATCCAGCCGTAGAAGTCGTC 984 ||||| |||| ||| || || || | |||||||||||| | ||| || ||| || || Sbjct 55675 GGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTAAGCCACCCATAGTGATCATC 55616 Query 985 GATGATTACGCAATCATGTTGTTGA---TATCCGTCCCACCATAGTCCACGAGGTTTATA 1041 ||| || ||| | |||| ||| || ||||||||||| ||| | || || || Sbjct 55615 GATAATGACG---TTGGGTTGCTGAATATAGCCGTCCCACCAGTCTCCTCTCGGCTTGTA 55559 Query 1042 GTATATGGAAGTCCCTCTTTGTTTAGCCTCCTCAAGTGCACGCTTTGATTTTCCGGAGCC 1101 ||| ||||| || || || ||||||||| || || ||| ||||| || Sbjct 55558 GTAGATGGATTCTCCAGTTGCCTTTGCCTCCTCATAAGCTCGGCGTGACTTTCCCACACC 55499 Query 1102 AGGTGGTCCCCAATAGTAGTATACTTCTGTTTTGAAATCACGTTC 1146 || || || ||||| |||| |||||||| || || || || Sbjct 55498 TGGCGGACCATGGTAGTAATATATCTCTGTTTTAAAGTCTCGGTC 55454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5506431652666