Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_025791.1
Length=1755
Score E
Sequences producing significant alignments: (Bits) Value
seq10842 87.8 2e-14
>seq10842
Length=63521
Score = 87.8 bits (96), Expect = 2e-14
Identities = 191/285 (67%), Gaps = 6/285 (2%)
Strand=Plus/Minus
Query 865 TGTTATCCATATGTATTTGCTGGTGAATTCCTCGAATCCTCCTTTAATCTGTACCTTGTA 924
||||||||| || |||| | |||| ||||| | |||||||| | || |||
Sbjct 55735 TGTTATCCAGATTCTTTTGGAGTTGAACACCTCGTAAGAGCCTTTAATAGGAACTCGGTA 55676
Query 925 TGGGTAGCGGTCCATTATTTTCAGCATTTCGTCATACTTTATCCAGCCGTAGAAGTCGTC 984
||||| |||| ||| || || || | |||||||||||| | ||| || ||| || ||
Sbjct 55675 GGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTAAGCCACCCATAGTGATCATC 55616
Query 985 GATGATTACGCAATCATGTTGTTGA---TATCCGTCCCACCATAGTCCACGAGGTTTATA 1041
||| || ||| | |||| ||| || ||||||||||| ||| | || || ||
Sbjct 55615 GATAATGACG---TTGGGTTGCTGAATATAGCCGTCCCACCAGTCTCCTCTCGGCTTGTA 55559
Query 1042 GTATATGGAAGTCCCTCTTTGTTTAGCCTCCTCAAGTGCACGCTTTGATTTTCCGGAGCC 1101
||| ||||| || || || ||||||||| || || ||| ||||| ||
Sbjct 55558 GTAGATGGATTCTCCAGTTGCCTTTGCCTCCTCATAAGCTCGGCGTGACTTTCCCACACC 55499
Query 1102 AGGTGGTCCCCAATAGTAGTATACTTCTGTTTTGAAATCACGTTC 1146
|| || || ||||| |||| |||||||| || || || ||
Sbjct 55498 TGGCGGACCATGGTAGTAATATATCTCTGTTTTAAAGTCTCGGTC 55454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5506431652666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |