Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_025792.1 Length=1790 Score E Sequences producing significant alignments: (Bits) Value seq10842 84.2 2e-13 >seq10842 Length=63521 Score = 84.2 bits (92), Expect = 2e-13 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 1018 GTAAGGGTATCTGTCAGTAATTTTGAGTAGTTCGTCGTATTTGATCCACCCGTAGAAGTC 1077 ||| ||||||| || | || ||||| |||||||| || || | |||||| ||| || Sbjct 55678 GTAGGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTAAGCCACCCATAGTGATC 55619 Query 1078 GTCGATGATGACGTTCTCTTGTTGCTTGTATCCGTCCCACCACAAGCCCCTTGGCTTGTA 1137 ||||| |||||||| ||| || | || ||||||||||| || || |||||||| Sbjct 55618 ATCGATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAGTCTCCTCTCGGCTTGTA 55559 Query 1138 GTAGAT 1143 |||||| Sbjct 55558 GTAGAT 55553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5618416026776