Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_027530.1 Length=1789 Score E Sequences producing significant alignments: (Bits) Value seq10842 102 9e-19 >seq10842 Length=63521 Score = 102 bits (112), Expect = 9e-19 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 893 CCTTTAATCTGAACTTTATACGGATAACGATCCATAATTTTAAGCATTTCATCATACTTT 952 |||||||| ||||| || || || || | ||| || || || | ||| |||||||| Sbjct 55695 CCTTTAATAGGAACTCGGTAGGGGTATCGGTTCATGATCTTGAGAAGTTCGTCATACTTA 55636 Query 953 ATCCATCCATAGAAATCATCTATGATGACGCATGTTTGCTGAGCGTAGCCGTCCCACCAG 1012 | ||| |||||| |||||| || |||||| | ||||||| ||||||||||||||| Sbjct 55635 AGCCACCCATAGTGATCATCGATAATGACGTTGGGTTGCTGAATATAGCCGTCCCACCAG 55576 Query 1013 AGACCTCTAGGTTTGTAGTAAATGGAATC 1041 ||||| || |||||||| ||||| || Sbjct 55575 TCTCCTCTCGGCTTGTAGTAGATGGATTC 55547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5615216473230